Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03342

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
3,522,072	+				+0.5
3,522,072	+				-0.3
3,522,072	+				+2.7
3,522,072	+				-0.6
3,522,072	+				-1.2
3,522,072	+				-0.8
3,522,072	+				+0.5
3,522,072	+				-1.5
3,522,072	+				+3.5
3,522,072	+				-1.5
3,522,072	+				-1.2
3,522,080	-				+2.8
3,522,080	-				-0.4
3,522,080	-				-1.3
3,522,080	-				-1.0
3,522,080	-				+0.7
3,522,080	-				+1.5
3,522,080	-				+0.0
3,522,080	-				-1.2
3,522,080	-				+0.4
3,522,080	-				+2.1
3,522,080	-				+0.9
3,522,095	+				-1.6
3,522,785	+				+0.7
3,522,793	-				-0.4
3,522,793	-				+1.2
3,522,793	-				-2.1
3,522,793	-				+0.9
3,522,803	-				-2.7
3,522,804	+				-0.9
3,522,804	+				-0.1
3,522,804	+				-0.9
3,522,804	+				-1.3
3,522,809	+				+0.1
3,522,812	-				-0.6
3,522,812	-				-1.4
3,522,812	-				-0.6
3,522,812	-				-0.2
3,522,812	-				-0.2
3,522,812	-				-0.4
3,522,812	-				-2.3
3,522,812	-				+0.2
3,522,812	-				-1.6
3,522,812	-				+0.4
3,522,812	-				-1.5
3,522,812	-				+0.7
3,522,812	-				+1.5
3,522,824	-				+0.5
3,522,893	-				+1.5
3,522,918	+				-1.2
3,522,918	+				-1.1
3,522,920	-				-0.7
3,522,932	+		CCNA_03342	0.10	-0.4
3,522,960	-		CCNA_03342	0.16	+2.5
3,522,964	+		CCNA_03342	0.17	-0.6
3,522,964	+		CCNA_03342	0.17	+1.2
3,522,964	+		CCNA_03342	0.17	+0.4
3,522,972	-		CCNA_03342	0.19	+2.8
3,522,972	-		CCNA_03342	0.19	+0.5
3,522,972	-		CCNA_03342	0.19	+0.1
3,522,972	-		CCNA_03342	0.19	-0.6
3,522,990	+		CCNA_03342	0.23	+0.1
3,522,998	-		CCNA_03342	0.25	+0.7
3,523,003	+		CCNA_03342	0.26	+2.1
3,523,003	-		CCNA_03342	0.26	-0.1
3,523,011	-		CCNA_03342	0.28	+1.5
3,523,056	+		CCNA_03342	0.38	+1.2
3,523,075	-		CCNA_03342	0.42	-1.6
3,523,082	+		CCNA_03342	0.44	-0.1
3,523,112	+		CCNA_03342	0.51	-2.5
3,523,112	+		CCNA_03342	0.51	-2.1
3,523,112	+		CCNA_03342	0.51	-2.5
3,523,112	+		CCNA_03342	0.51	-1.5
3,523,112	+		CCNA_03342	0.51	-0.9
3,523,120	-		CCNA_03342	0.52	-1.1
3,523,224	+		CCNA_03342	0.76	-1.3
3,523,317	-				+0.7
3,523,337	+				-0.5
3,523,342	+				+1.8
3,523,345	-				-2.2
3,523,345	-				+0.3
3,523,375	-				+0.6
3,523,381	-				-0.4
3,523,385	+				+1.4
3,523,390	+				-1.3
3,523,414	+		CCNA_03343	0.10	-0.6
3,523,422	-		CCNA_03343	0.11	+2.0
3,523,422	-		CCNA_03343	0.11	-1.4
3,523,483	+		CCNA_03343	0.18	-1.2
3,523,510	-		CCNA_03343	0.21	-0.5
3,523,611	-		CCNA_03343	0.33	+0.9
3,523,611	-		CCNA_03343	0.33	-0.0
3,523,627	-		CCNA_03343	0.35	+1.8
3,523,632	-		CCNA_03343	0.35	+0.8
3,523,647	+		CCNA_03343	0.37	+0.1
3,523,650	+		CCNA_03343	0.37	-2.9
3,523,697	-		CCNA_03343	0.43	+1.1
3,523,701	-		CCNA_03343	0.43	-2.3
3,523,733	+		CCNA_03343	0.47	-0.5
3,523,751	+		CCNA_03343	0.49	-0.3
3,523,751	+		CCNA_03343	0.49	-0.5
3,523,751	+		CCNA_03343	0.49	-0.9
3,523,759	-		CCNA_03343	0.50	+1.5
3,523,759	-		CCNA_03343	0.50	+1.9
3,523,759	-		CCNA_03343	0.50	+1.6
3,523,764	-		CCNA_03343	0.50	-0.8
3,523,787	+		CCNA_03343	0.53	-0.3
3,523,787	+		CCNA_03343	0.53	-0.6
3,523,787	+		CCNA_03343	0.53	-1.6
3,523,790	-		CCNA_03343	0.53	-2.8
3,523,795	-		CCNA_03343	0.54	-2.2
3,523,795	-		CCNA_03343	0.54	-2.1
3,523,795	-		CCNA_03343	0.54	+1.0
3,523,795	-		CCNA_03343	0.54	-2.0
3,523,806	+		CCNA_03343	0.55	+2.6
3,523,809	-		CCNA_03343	0.56	+0.5
3,523,860	-		CCNA_03343	0.61	-0.0
3,523,875	-		CCNA_03343	0.63	-0.3
3,523,885	+		CCNA_03343	0.64	+0.2
3,523,901	-		CCNA_03343	0.66	-1.1
3,523,913	+		CCNA_03343	0.68	+1.5
3,523,916	-		CCNA_03343	0.68	-0.2
3,523,963	-		CCNA_03343	0.73	+0.6
3,523,968	-		CCNA_03343	0.74	-0.1
3,524,020	+		CCNA_03343	0.80	-0.3
3,524,115	+				+0.7
3,524,123	-				+0.7
3,524,123	-				+1.9
3,524,127	+				-2.1
3,524,134	+				+1.5
3,524,167	+				+0.7
3,524,180	+				-2.0
3,524,180	+				-0.3
3,524,180	+				-1.2
3,524,180	-				+1.4
3,524,188	-				-1.0
3,524,188	-				-0.5
3,524,188	-				-1.7
3,524,236	+				-1.3
3,524,246	-				-0.2
3,524,296	+		CCNA_03344	0.11	+0.5
3,524,304	-		CCNA_03344	0.12	+0.1
3,524,325	-		CCNA_03344	0.14	+0.7