Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02555

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
2,701,667	-		CCNA_02553	0.80	+1.2
2,701,682	-		CCNA_02553	0.81	-2.7
2,701,688	+		CCNA_02553	0.81	+3.0
2,701,705	+		CCNA_02553	0.82	+3.0
2,701,712	-		CCNA_02553	0.82	+1.6
2,701,734	-		CCNA_02553	0.83	+2.9
2,701,747	+		CCNA_02553	0.84	+3.1
2,701,748	-		CCNA_02553	0.84	+2.2
2,701,764	+		CCNA_02553	0.84	+2.4
2,701,774	+		CCNA_02553	0.85	+3.7
2,701,789	-		CCNA_02553	0.85	+3.3
2,701,796	+		CCNA_02553	0.86	+2.6
2,701,796	+		CCNA_02553	0.86	+3.4
2,701,824	+		CCNA_02553	0.87	+1.9
2,701,827	-		CCNA_02553	0.87	-0.1
2,701,852	-		CCNA_02553	0.88	+2.8
2,701,905	+				+2.9
2,701,926	+				+2.7
2,701,926	+				+3.2
2,701,926	+				+2.4
2,701,926	+				+3.6
2,701,934	-				+0.9
2,701,947	+				+3.1
2,701,947	+				+3.3
2,702,006	-				+0.9
2,702,025	+				+2.8
2,702,025	+				+3.5
2,702,025	+				+3.2
2,702,025	+				+2.8
2,702,033	-				+1.9
2,702,033	-				+0.2
2,702,033	-				+1.6
2,702,033	-				-0.4
2,702,070	+				+2.8
2,702,090	-				+1.6
2,702,137	+				+1.3
2,702,156	+				+0.4
2,702,157	+				+1.0
2,702,157	+				+1.3
2,702,165	-				-1.7
2,702,252	+				+0.6
2,702,252	+				-1.8
2,702,252	+				-0.9
2,702,294	+		CCNA_02554	0.15	-0.0
2,702,304	+		CCNA_02554	0.18	+2.1
2,702,306	-		CCNA_02554	0.18	-1.5
2,702,329	-		CCNA_02554	0.25	+0.3
2,702,345	+		CCNA_02554	0.29	+2.9
2,702,427	+		CCNA_02554	0.52	-2.2
2,702,427	+		CCNA_02554	0.52	-3.1
2,702,427	+		CCNA_02554	0.52	-1.5
2,702,427	+		CCNA_02554	0.52	-0.3
2,702,427	+		CCNA_02554	0.52	-1.4
2,702,427	+		CCNA_02554	0.52	+1.0
2,702,427	+		CCNA_02554	0.52	-0.7
2,702,435	-		CCNA_02554	0.54	+1.0
2,702,435	-		CCNA_02554	0.54	-0.3
2,702,435	-		CCNA_02554	0.54	-1.0
2,702,435	-		CCNA_02554	0.54	+1.1
2,702,436	-		CCNA_02554	0.54	+1.1
2,702,455	+		CCNA_02554	0.60	-1.6
2,702,455	+		CCNA_02554	0.60	+1.4
2,702,455	+		CCNA_02554	0.60	-2.3
2,702,455	+		CCNA_02554	0.60	+0.6
2,702,460	+		CCNA_02554	0.61	-2.4
2,702,460	+		CCNA_02554	0.61	+0.9
2,702,460	+		CCNA_02554	0.61	+1.5
2,702,460	+		CCNA_02554	0.61	+0.8
2,702,460	+		CCNA_02554	0.61	+0.5
2,702,460	+		CCNA_02554	0.61	+0.3
2,702,465	+		CCNA_02554	0.62	+0.9
2,702,468	-		CCNA_02554	0.63	+1.6
2,702,468	-		CCNA_02554	0.63	+0.5
2,702,492	+		CCNA_02554	0.70	+2.0
2,702,506	-		CCNA_02554	0.74	-0.5
2,702,529	+		CCNA_02554	0.80	+1.5
2,702,538	-		CCNA_02554	0.82	+0.9
2,702,539	+		CCNA_02554	0.83	+2.6
2,702,559	+		CCNA_02554	0.88	+0.4
2,702,565	-				-0.2
2,702,567	-				-1.7
2,702,581	-				+0.2
2,702,581	-				-2.0
2,702,583	+				+1.9
2,702,591	-				-1.4
2,702,592	+				+0.7
2,702,605	-				-0.4
2,702,626	+				+0.7
2,702,667	-				-1.2
2,702,672	+				-1.2
2,702,672	+				-1.7
2,702,672	+				+0.5
2,702,789	-		CCNA_02555	0.29	+3.6
2,702,810	+		CCNA_02555	0.34	+1.2
2,702,810	+		CCNA_02555	0.34	+2.3
2,702,810	+		CCNA_02555	0.34	+0.5
2,702,810	+		CCNA_02555	0.34	+0.9
2,702,810	+		CCNA_02555	0.34	-1.8
2,702,818	-		CCNA_02555	0.36	+1.8
2,702,818	-		CCNA_02555	0.36	+2.5
2,702,818	-		CCNA_02555	0.36	+0.2
2,702,840	+		CCNA_02555	0.41	+1.6
2,702,848	-		CCNA_02555	0.43	-1.0
2,702,848	-		CCNA_02555	0.43	-1.4
2,702,861	+		CCNA_02555	0.46	+0.1
2,702,880	-		CCNA_02555	0.50	+0.5
2,702,958	-		CCNA_02555	0.68	-0.2
2,702,966	-		CCNA_02555	0.70	-1.3
2,702,966	-		CCNA_02555	0.70	-0.0
2,702,973	+		CCNA_02555	0.71	+0.3
2,702,986	-		CCNA_02555	0.74	+1.6
2,702,993	-		CCNA_02555	0.76	-0.4
2,702,995	+		CCNA_02555	0.77	-0.8
2,702,995	+		CCNA_02555	0.77	+0.5
2,702,995	+		CCNA_02555	0.77	-0.9
2,702,995	+		CCNA_02555	0.77	+0.4
2,702,996	+		CCNA_02555	0.77	-1.3
2,703,000	+		CCNA_02555	0.78	-0.3
2,703,003	-		CCNA_02555	0.78	+4.2
2,703,021	+		CCNA_02555	0.83	-1.7
2,703,021	+		CCNA_02555	0.83	+0.7
2,703,029	-		CCNA_02555	0.84	+0.1
2,703,053	-				+2.7
2,703,137	-				+1.4
2,703,137	-				-1.5
2,703,162	+				+1.6
2,703,162	+				-0.3
2,703,170	-				+0.4
2,703,204	+				+1.0
2,703,206	-				-0.9
2,703,208	+				+3.5
2,703,246	-		CCNA_02556	0.16	+1.3
2,703,287	+		CCNA_02556	0.24	-1.2
2,703,290	-		CCNA_02556	0.24	-0.9
2,703,301	-		CCNA_02556	0.26	+0.8
2,703,307	+		CCNA_02556	0.27	+0.3
2,703,315	-		CCNA_02556	0.28	-1.1
2,703,330	+		CCNA_02556	0.31	+1.0
2,703,330	+		CCNA_02556	0.31	-1.3
2,703,330	+		CCNA_02556	0.31	+1.0
2,703,330	+		CCNA_02556	0.31	-1.2
2,703,330	+		CCNA_02556	0.31	-1.4
2,703,330	+		CCNA_02556	0.31	-0.0
2,703,330	+		CCNA_02556	0.31	-1.2
2,703,330	+		CCNA_02556	0.31	+0.4
2,703,338	-		CCNA_02556	0.32	+3.4
2,703,338	-		CCNA_02556	0.32	-1.4
2,703,338	-		CCNA_02556	0.32	+0.4
2,703,338	-		CCNA_02556	0.32	-0.4
2,703,338	-		CCNA_02556	0.32	+1.5
2,703,386	+		CCNA_02556	0.41	+1.6
2,703,402	-		CCNA_02556	0.43	+0.6
2,703,411	+		CCNA_02556	0.45	-1.1
2,703,423	+		CCNA_02556	0.47	+0.4
2,703,431	+		CCNA_02556	0.48	+0.0
2,703,449	-		CCNA_02556	0.51	-2.3
2,703,476	+		CCNA_02556	0.56	+0.6
2,703,497	+		CCNA_02556	0.60	-1.1
2,703,505	-		CCNA_02556	0.61	-0.4
2,703,505	-		CCNA_02556	0.61	+1.7
2,703,505	-		CCNA_02556	0.61	-1.4
2,703,505	-		CCNA_02556	0.61	+0.7
2,703,505	-		CCNA_02556	0.61	+1.0
2,703,519	-		CCNA_02556	0.63	+2.0
2,703,528	+		CCNA_02556	0.65	+1.6
2,703,551	+		CCNA_02556	0.69	-1.9
2,703,559	-		CCNA_02556	0.70	-1.3
2,703,559	-		CCNA_02556	0.70	-0.8
2,703,565	+		CCNA_02556	0.71	+2.0
2,703,578	-		CCNA_02556	0.74	+0.8
2,703,596	+		CCNA_02556	0.77	-1.5
2,703,598	+		CCNA_02556	0.77	-0.8
2,703,609	-		CCNA_02556	0.79	+0.1
2,703,644	+		CCNA_02556	0.85	-1.5
2,703,644	+		CCNA_02556	0.85	+1.7
2,703,650	+		CCNA_02556	0.86	+0.4
2,703,652	-		CCNA_02556	0.86	-0.3
2,703,665	+		CCNA_02556	0.88	+0.9
2,703,668	-		CCNA_02556	0.89	+3.2
2,703,690	+				-0.7
2,703,704	+				+0.7
2,703,704	+				-2.3
2,703,704	+				-0.5
2,703,704	+				-2.2
2,703,704	+				-1.4
2,703,712	-				-0.9
2,703,712	-				+0.1
2,703,712	-				+0.0
2,703,712	-				-0.7
2,703,712	-				+0.1
2,703,712	-				-2.4
2,703,743	+				+2.0
2,703,744	-				-1.1
2,703,760	+				+0.2
2,703,764	+				+0.2
2,703,775	+				+2.3
2,703,804	-				-0.6
2,703,804	-				-0.6
2,703,806	+				-0.8
2,703,814	-				+0.1
2,703,857	+				+0.6
2,703,865	-				+2.7
2,703,865	-				-2.1
2,703,865	-				-0.6
2,703,865	-				-2.4
2,703,865	-				-0.8
2,703,915	+				-0.7
2,703,938	-		CCNA_02557	0.11	-1.1
2,703,969	-		CCNA_02557	0.15	+0.3
2,704,004	+		CCNA_02557	0.19	+0.8
2,704,006	+		CCNA_02557	0.20	+2.0
2,704,011	+		CCNA_02557	0.20	-0.3
2,704,011	+		CCNA_02557	0.20	-1.7