Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02507

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
2,655,654	+				-1.8
2,655,715	-				-0.2
2,655,795	-				+1.0
2,655,798	+				-0.7
2,655,798	+				+0.0
2,655,806	-				+1.2
2,655,807	-				-0.9
2,655,835	+				-1.3
2,655,835	+				-2.1
2,655,835	+				-1.0
2,655,835	+				-0.9
2,655,842	-				+2.0
2,655,843	-				-0.5
2,655,863	+				+1.3
2,655,871	-				-1.8
2,655,886	+				-1.0
2,655,886	+				-2.6
2,655,910	+				-1.4
2,655,941	-				+0.8
2,655,981	+				-0.0
2,655,989	-				-0.1
2,655,989	-				+0.5
2,655,990	-				-1.0
2,656,031	-				-2.4
2,656,031	-				-0.4
2,656,038	+				+0.6
2,656,040	+				+0.6
2,656,040	+				-0.8
2,656,046	-				+0.8
2,656,058	+				-0.1
2,656,067	-				-0.7
2,656,076	+				+1.0
2,656,093	-		CCNA_02506	0.13	+2.6
2,656,113	+		CCNA_02506	0.28	+0.6
2,656,113	-		CCNA_02506	0.28	+3.3
2,656,145	+		CCNA_02506	0.50	+2.9
2,656,145	+		CCNA_02506	0.50	+0.2
2,656,145	+		CCNA_02506	0.50	-0.3
2,656,153	-		CCNA_02506	0.56	-0.4
2,656,193	-		CCNA_02506	0.84	+0.4
2,656,217	+				-3.5
2,656,259	-				-0.8
2,656,313	-				-1.3
2,656,371	+				+0.8
2,656,379	-				+0.2
2,656,379	-				-1.4
2,656,379	-				+1.0
2,656,653	+				-3.0
2,656,655	+				-0.7
2,656,663	+				-1.6
2,656,666	-				+1.1
2,656,669	+				-0.9
2,656,671	-				+0.4
2,656,677	-				+1.0
2,656,684	-				-0.3
2,656,691	-				-0.1
2,656,723	+				-0.5
2,656,793	+				+0.6
2,656,801	+		CCNA_02507	0.10	-1.4
2,656,801	+		CCNA_02507	0.10	-2.9
2,656,809	-		CCNA_02507	0.11	-0.6
2,656,809	-		CCNA_02507	0.11	+1.0
2,656,835	-		CCNA_02507	0.12	-1.1
2,656,888	-		CCNA_02507	0.16	+0.8
2,656,889	-		CCNA_02507	0.16	+1.2
2,656,902	-		CCNA_02507	0.17	-0.8
2,656,912	+		CCNA_02507	0.17	+0.9
2,656,912	+		CCNA_02507	0.17	-0.8
2,656,922	+				+1.6
2,656,949	+		CCNA_02507	0.20	-0.2
2,656,949	+		CCNA_02507	0.20	+0.6
2,656,959	+				+3.6
2,656,972	+		CCNA_02507	0.21	+1.2
2,656,972	+		CCNA_02507	0.21	-2.1
2,656,980	-		CCNA_02507	0.22	-0.2
2,656,980	-		CCNA_02507	0.22	-0.6
2,656,995	+		CCNA_02507	0.23	-1.6
2,656,995	-		CCNA_02507	0.23	+0.8
2,657,000	+		CCNA_02507	0.23	-1.7
2,657,013	+		CCNA_02507	0.24	+0.1
2,657,019	+		CCNA_02507	0.25	-0.3
2,657,021	-		CCNA_02507	0.25	+1.2
2,657,037	+		CCNA_02507	0.26	+1.4
2,657,045	-		CCNA_02507	0.26	+0.9
2,657,077	-		CCNA_02507	0.28	-0.9
2,657,125	-		CCNA_02507	0.32	-1.6
2,657,131	+		CCNA_02507	0.32	+0.2
2,657,137	+		CCNA_02507	0.32	-3.1
2,657,193	-		CCNA_02507	0.36	-0.7
2,657,278	-		CCNA_02507	0.42	+0.0
2,657,278	-		CCNA_02507	0.42	-0.8
2,657,309	+				+1.2
2,657,312	-		CCNA_02507	0.44	+0.2
2,657,317	-		CCNA_02507	0.44	-0.2
2,657,317	-		CCNA_02507	0.44	-1.1
2,657,322	-		CCNA_02507	0.45	-0.7
2,657,350	+		CCNA_02507	0.47	+1.4
2,657,376	+		CCNA_02507	0.48	-2.0
2,657,388	-		CCNA_02507	0.49	+0.4
2,657,388	-		CCNA_02507	0.49	-1.2
2,657,422	+		CCNA_02507	0.51	-0.1
2,657,442	-		CCNA_02507	0.53	+0.6
2,657,447	+		CCNA_02507	0.53	+2.2
2,657,474	+		CCNA_02507	0.55	-1.0
2,657,474	+		CCNA_02507	0.55	-0.6
2,657,489	+		CCNA_02507	0.56	+0.5
2,657,532	-		CCNA_02507	0.59	+0.2
2,657,540	+		CCNA_02507	0.59	-0.4
2,657,540	+		CCNA_02507	0.59	+2.2
2,657,560	+		CCNA_02507	0.60	-1.2
2,657,568	-		CCNA_02507	0.61	-0.3
2,657,568	-		CCNA_02507	0.61	-0.3
2,657,568	-		CCNA_02507	0.61	-1.1
2,657,568	-		CCNA_02507	0.61	-0.7
2,657,583	-		CCNA_02507	0.62	-0.1
2,657,586	+		CCNA_02507	0.62	+0.4
2,657,591	+		CCNA_02507	0.63	+0.8
2,657,599	-				+1.6
2,657,645	+		CCNA_02507	0.66	-1.0
2,657,653	-		CCNA_02507	0.67	+1.2
2,657,655	+		CCNA_02507	0.67	+2.5
2,657,663	-		CCNA_02507	0.67	+1.9
2,657,663	-		CCNA_02507	0.67	-0.8
2,657,670	+		CCNA_02507	0.68	-0.7
2,657,689	-		CCNA_02507	0.69	-0.2
2,657,755	-		CCNA_02507	0.73	+2.0
2,657,765	+		CCNA_02507	0.74	+0.4
2,657,773	-		CCNA_02507	0.75	-1.5
2,657,773	-		CCNA_02507	0.75	-2.2
2,657,778	-		CCNA_02507	0.75	-3.3
2,657,826	+		CCNA_02507	0.78	-1.4
2,657,826	+		CCNA_02507	0.78	-0.7
2,657,828	-		CCNA_02507	0.78	-1.4
2,657,834	-		CCNA_02507	0.79	-1.5
2,657,834	-		CCNA_02507	0.79	+0.1
2,657,848	+		CCNA_02507	0.80	-0.7
2,657,853	-		CCNA_02507	0.80	+1.4
2,657,927	-		CCNA_02507	0.85	-1.3
2,657,927	-		CCNA_02507	0.85	-0.7
2,657,971	+		CCNA_02507	0.88	-0.2
2,657,973	-		CCNA_02507	0.88	-0.6
2,658,001	-		CCNA_02507	0.90	-0.8
2,658,012	+				+0.1
2,658,067	+				-1.4
2,658,087	+				-1.1
2,658,102	-				+2.3
2,658,148	+				+0.2
2,658,203	+				-1.2
2,658,224	+				+4.0
2,658,229	+				-0.9
2,658,232	-				+1.6
2,658,261	+				+0.7
2,658,273	+				-0.1
2,658,279	+				+0.1
2,658,296	+				-0.6
2,658,302	-				+0.4
2,658,306	+				-0.4
2,658,314	-				-0.0
2,658,323	+				-1.7
2,658,323	+				-2.0
2,658,336	-				+0.8
2,658,350	+				-2.9
2,658,350	+				-2.5
2,658,350	+				+0.7
2,658,350	+				-0.2
2,658,350	+				+0.3
2,658,358	-				-1.9
2,658,358	-				+3.8
2,658,365	+				+1.1
2,658,365	+				+2.0
2,658,373	-				+0.4
2,658,418	-				+1.9
2,658,421	+				-1.0
2,658,426	+				-1.6
2,658,426	+				+1.2
2,658,426	+				-3.5
2,658,434	-				-0.2
2,658,441	+				-0.5
2,658,456	+				-1.6
2,658,456	+				+1.0
2,658,456	+				-2.0
2,658,456	+				-1.2
2,658,464	-				+1.9
2,658,464	-				-1.7
2,658,471	+		CCNA_02508	0.10	-1.7
2,658,479	-		CCNA_02508	0.11	+0.8
2,658,479	-		CCNA_02508	0.11	+0.4
2,658,524	+		CCNA_02508	0.14	-2.2
2,658,524	+		CCNA_02508	0.14	-1.7
2,658,575	+		CCNA_02508	0.18	+0.3
2,658,602	+		CCNA_02508	0.21	+2.8
2,658,603	+		CCNA_02508	0.21	+0.9
2,658,610	-		CCNA_02508	0.21	-2.9
2,658,627	-		CCNA_02508	0.23	-1.1
2,658,630	+		CCNA_02508	0.23	-3.4
2,658,638	-		CCNA_02508	0.23	-1.8
2,658,638	-		CCNA_02508	0.23	-1.5
2,658,638	-		CCNA_02508	0.23	-1.6
2,658,643	-		CCNA_02508	0.24	+0.1
2,658,659	-		CCNA_02508	0.25	-0.1
2,658,659	-		CCNA_02508	0.25	+2.3
2,658,680	+		CCNA_02508	0.27	-0.4
2,658,693	+		CCNA_02508	0.28	-2.5
2,658,722	-		CCNA_02508	0.30	+1.6
2,658,768	+		CCNA_02508	0.34	-0.7
2,658,776	-		CCNA_02508	0.34	-3.0
2,658,813	+		CCNA_02508	0.37	-0.5
2,658,821	-		CCNA_02508	0.38	-0.2
2,658,825	+		CCNA_02508	0.38	-1.6
2,658,830	+		CCNA_02508	0.39	-0.2
2,658,838	-		CCNA_02508	0.39	+1.6
2,658,838	-		CCNA_02508	0.39	-1.1
2,658,838	-		CCNA_02508	0.39	-1.2
2,658,901	+		CCNA_02508	0.44	+0.1
2,658,938	-		CCNA_02508	0.47	-2.6
2,658,938	-		CCNA_02508	0.47	+0.8
2,658,958	+		CCNA_02508	0.49	-0.5
2,658,958	+		CCNA_02508	0.49	+0.9
2,658,963	+		CCNA_02508	0.49	-2.1
2,659,007	-		CCNA_02508	0.53	-0.9
2,659,139	-		CCNA_02508	0.63	+1.0