Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02357

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
2,495,513	+		CCNA_02356	0.12	+2.0
2,495,513	+		CCNA_02356	0.12	-0.6
2,495,513	+		CCNA_02356	0.12	-1.0
2,495,513	+		CCNA_02356	0.12	-0.2
2,495,518	+		CCNA_02356	0.13	+1.7
2,495,536	-		CCNA_02356	0.15	-2.1
2,495,547	-		CCNA_02356	0.16	+0.3
2,495,625	-		CCNA_02356	0.24	-0.1
2,495,640	+		CCNA_02356	0.25	+2.6
2,495,648	-		CCNA_02356	0.26	-2.3
2,495,648	-		CCNA_02356	0.26	-2.1
2,495,723	-		CCNA_02356	0.34	+1.0
2,495,783	+		CCNA_02356	0.40	+2.3
2,495,813	+		CCNA_02356	0.43	+3.4
2,495,821	-		CCNA_02356	0.44	-1.3
2,495,821	-		CCNA_02356	0.44	-2.5
2,495,821	-		CCNA_02356	0.44	+1.6
2,495,821	-		CCNA_02356	0.44	+0.2
2,495,910	+		CCNA_02356	0.53	-1.2
2,495,910	+		CCNA_02356	0.53	-1.1
2,495,955	-		CCNA_02356	0.58	+1.6
2,495,955	-		CCNA_02356	0.58	+0.5
2,496,033	+		CCNA_02356	0.66	-0.2
2,496,033	+		CCNA_02356	0.66	-1.1
2,496,033	+		CCNA_02356	0.66	-1.2
2,496,077	+		CCNA_02356	0.71	-0.9
2,496,077	+		CCNA_02356	0.71	+0.3
2,496,085	-		CCNA_02356	0.71	-0.4
2,496,085	-		CCNA_02356	0.71	+1.7
2,496,158	+		CCNA_02356	0.79	+0.1
2,496,165	+		CCNA_02356	0.80	+2.3
2,496,173	-		CCNA_02356	0.80	+0.6
2,496,180	+		CCNA_02356	0.81	+1.3
2,496,180	+		CCNA_02356	0.81	+0.3
2,496,180	+		CCNA_02356	0.81	+1.8
2,496,180	+		CCNA_02356	0.81	+1.0
2,496,180	+		CCNA_02356	0.81	+0.4
2,496,180	+		CCNA_02356	0.81	+1.9
2,496,180	+		CCNA_02356	0.81	-1.1
2,496,180	+		CCNA_02356	0.81	+1.0
2,496,180	+		CCNA_02356	0.81	-1.6
2,496,188	-		CCNA_02356	0.82	+1.6
2,496,188	-		CCNA_02356	0.82	+0.3
2,496,188	-		CCNA_02356	0.82	+2.0
2,496,188	-		CCNA_02356	0.82	-2.2
2,496,188	-		CCNA_02356	0.82	+3.1
2,496,188	-		CCNA_02356	0.82	-0.4
2,496,188	-		CCNA_02356	0.82	-2.2
2,496,211	-		CCNA_02356	0.84	-3.0
2,496,215	+		CCNA_02356	0.85	+0.0
2,496,254	+		CCNA_02356	0.89	+0.1
2,496,284	+				+0.6
2,496,284	+				-0.2
2,496,292	-				-2.3
2,496,292	-				-0.1
2,496,322	-				-1.5
2,496,342	+				-0.6
2,496,350	-				-2.9
2,496,350	-				+1.3
2,496,350	-				+1.4
2,496,396	+				-0.6
2,496,404	-				+0.7
2,496,455	-				+1.3
2,496,468	+				+0.4
2,496,468	-				+2.3
2,496,476	-				+1.0
2,496,483	-				-0.7
2,496,487	+				+0.7
2,496,492	+				+1.5
2,496,549	+				+1.0
2,496,567	+				-0.1
2,496,575	-				+0.3
2,496,575	-				-0.2
2,496,579	+				+1.3
2,496,579	+				+1.6
2,496,754	-		CCNA_02357	0.17	-0.9
2,496,754	-		CCNA_02357	0.17	+0.3
2,496,800	-		CCNA_02357	0.20	+1.1
2,496,810	-				+2.0
2,496,825	+		CCNA_02357	0.22	+0.6
2,496,872	-		CCNA_02357	0.25	+1.7
2,496,882	+		CCNA_02357	0.26	+3.1
2,496,924	+		CCNA_02357	0.28	-1.2
2,496,945	-		CCNA_02357	0.30	-0.6
2,496,965	+		CCNA_02357	0.31	+0.4
2,496,978	-		CCNA_02357	0.32	-2.8
2,497,039	-		CCNA_02357	0.36	-0.5
2,497,058	+		CCNA_02357	0.37	+1.7
2,497,113	-		CCNA_02357	0.41	+1.9
2,497,113	-		CCNA_02357	0.41	-0.7
2,497,126	-		CCNA_02357	0.42	+1.0
2,497,126	-		CCNA_02357	0.42	+1.5
2,497,128	+		CCNA_02357	0.42	-1.1
2,497,149	+		CCNA_02357	0.43	-1.6
2,497,172	+		CCNA_02357	0.45	-0.8
2,497,180	-		CCNA_02357	0.45	+1.3
2,497,188	+		CCNA_02357	0.46	+0.3
2,497,216	-		CCNA_02357	0.48	+1.5
2,497,241	+		CCNA_02357	0.49	-0.8
2,497,249	-		CCNA_02357	0.50	-2.0
2,497,249	-		CCNA_02357	0.50	-0.5
2,497,254	+		CCNA_02357	0.50	+1.3
2,497,255	-		CCNA_02357	0.50	+2.2
2,497,259	+		CCNA_02357	0.51	+1.2
2,497,262	-		CCNA_02357	0.51	+1.6
2,497,292	-		CCNA_02357	0.53	-2.0
2,497,312	+		CCNA_02357	0.54	-0.5
2,497,312	+		CCNA_02357	0.54	+0.4
2,497,312	+		CCNA_02357	0.54	-2.6
2,497,351	-		CCNA_02357	0.57	+2.2
2,497,355	+		CCNA_02357	0.57	-0.4
2,497,355	+		CCNA_02357	0.57	+1.5
2,497,355	+		CCNA_02357	0.57	+1.8
2,497,363	-		CCNA_02357	0.58	-1.3
2,497,372	-		CCNA_02357	0.58	-1.9
2,497,405	-		CCNA_02357	0.60	+2.8
2,497,456	-		CCNA_02357	0.64	+0.3
2,497,469	-		CCNA_02357	0.65	+1.0
2,497,499	-		CCNA_02357	0.67	+1.6
2,497,615	-		CCNA_02357	0.74	+2.0
2,497,669	-		CCNA_02357	0.78	+0.5
2,497,683	-		CCNA_02357	0.79	-0.1
2,497,683	-		CCNA_02357	0.79	-0.2
2,497,683	-		CCNA_02357	0.79	+1.3
2,497,720	+		CCNA_02357	0.81	-2.3
2,497,767	-		CCNA_02357	0.85	-1.3
2,497,782	+		CCNA_02357	0.86	-2.2
2,497,790	+		CCNA_02357	0.86	+0.3
2,497,817	+		CCNA_02357	0.88	+0.6
2,497,817	+		CCNA_02357	0.88	+0.0
2,497,817	+		CCNA_02357	0.88	-0.4
2,497,817	+		CCNA_02357	0.88	+2.2
2,497,825	-		CCNA_02357	0.89	-0.9
2,497,858	-				+0.5
2,497,898	+				-1.6
2,497,898	+				-2.3
2,497,898	+				-0.2
2,497,906	-				-0.8
2,497,906	-				+0.1
2,497,906	-				+0.8
2,497,958	-				+0.2
2,497,961	+				-0.9
2,497,963	-				+2.9
2,497,968	-				-0.4
2,497,996	-				-1.9
2,497,996	-				-0.7
2,498,005	+				+0.2
2,498,005	+				-0.4
2,498,005	+				-0.9
2,498,013	-				-0.9
2,498,013	-				-0.5
2,498,026	+				-1.4
2,498,047	-				+0.4
2,498,087	-				-1.9
2,498,087	-				+3.2
2,498,094	+				+2.6
2,498,102	-				+1.4
2,498,166	+		CCNA_02358	0.18	-1.8
2,498,166	+		CCNA_02358	0.18	-1.3
2,498,173	+		CCNA_02358	0.19	-1.7
2,498,177	+		CCNA_02358	0.20	+1.6
2,498,203	-		CCNA_02358	0.25	+0.9
2,498,229	+		CCNA_02358	0.30	-1.5
2,498,327	-		CCNA_02358	0.49	+2.7
2,498,332	-		CCNA_02358	0.50	+0.4
2,498,357	+		CCNA_02358	0.54	-1.5
2,498,357	+		CCNA_02358	0.54	-0.6
2,498,365	-		CCNA_02358	0.56	+2.0
2,498,398	+		CCNA_02358	0.62	+0.9
2,498,403	+		CCNA_02358	0.63	+0.1
2,498,403	+		CCNA_02358	0.63	+1.6
2,498,406	-		CCNA_02358	0.64	-2.0
2,498,408	+		CCNA_02358	0.64	+1.4
2,498,411	-		CCNA_02358	0.65	-0.4
2,498,478	+		CCNA_02358	0.77	+2.1
2,498,486	-		CCNA_02358	0.79	-3.0
2,498,488	+		CCNA_02358	0.79	+2.3
2,498,488	+		CCNA_02358	0.79	+0.3
2,498,502	+		CCNA_02358	0.82	+1.1
2,498,542	-		CCNA_02358	0.90	+0.2
2,498,566	+				-1.3
2,498,566	+				+2.3
2,498,572	+				-0.4
2,498,618	-				-0.7
2,498,627	+				-0.7
2,498,627	+				+0.0
2,498,633	+				+2.2
2,498,633	+				-1.4
2,498,634	+				+0.5
2,498,634	+				-0.6
2,498,635	-				+0.7
2,498,641	-				-0.7
2,498,683	+				+2.0
2,498,683	+				+0.2
2,498,691	-				-0.7
2,498,691	-				-0.7
2,498,691	-				+0.2
2,498,691	-				+1.6
2,498,691	-				+0.1
2,498,691	-				+0.6
2,498,740	-		CCNA_02359	0.10	-1.7
2,498,776	+		CCNA_02359	0.14	-0.7
2,498,827	-		CCNA_02359	0.18	+1.5
2,498,827	-		CCNA_02359	0.18	+0.5
2,498,848	-		CCNA_02359	0.20	+0.5
2,498,852	-		CCNA_02359	0.21	+1.4
2,498,855	+		CCNA_02359	0.21	+1.4
2,498,855	+		CCNA_02359	0.21	-0.8
2,498,863	-		CCNA_02359	0.22	+0.5
2,498,863	-		CCNA_02359	0.22	+0.5
2,498,985	+		CCNA_02359	0.34	+0.4
2,498,993	-		CCNA_02359	0.34	-1.3