Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01674

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
1,795,008	+				+2.0
1,795,016	-				+0.3
1,795,032	-				-0.3
1,795,043	-				-1.6
1,795,100	+				+0.1
1,795,131	+		CCNA_01673	0.12	+2.4
1,795,138	-		CCNA_01673	0.13	-0.8
1,795,156	+		CCNA_01673	0.15	-0.6
1,795,197	-		CCNA_01673	0.19	-0.9
1,795,210	+		CCNA_01673	0.20	+0.7
1,795,218	-		CCNA_01673	0.21	-1.6
1,795,235	-		CCNA_01673	0.23	-0.7
1,795,345	-		CCNA_01673	0.34	-2.0
1,795,377	-		CCNA_01673	0.38	+1.4
1,795,382	+		CCNA_01673	0.38	+0.3
1,795,387	+		CCNA_01673	0.39	-0.8
1,795,387	+		CCNA_01673	0.39	-0.9
1,795,390	-		CCNA_01673	0.39	-0.9
1,795,390	-		CCNA_01673	0.39	-1.7
1,795,395	-		CCNA_01673	0.40	+0.4
1,795,395	-		CCNA_01673	0.40	-1.2
1,795,395	-		CCNA_01673	0.40	+0.7
1,795,395	-		CCNA_01673	0.40	+0.3
1,795,395	-		CCNA_01673	0.40	-3.6
1,795,395	-		CCNA_01673	0.40	-0.9
1,795,493	+		CCNA_01673	0.50	-0.0
1,795,526	-		CCNA_01673	0.54	-2.0
1,795,528	+		CCNA_01673	0.54	-0.8
1,795,528	+		CCNA_01673	0.54	+2.1
1,795,536	-		CCNA_01673	0.55	-1.1
1,795,541	+		CCNA_01673	0.55	+1.7
1,795,541	+		CCNA_01673	0.55	-0.5
1,795,541	+		CCNA_01673	0.55	-0.6
1,795,549	-		CCNA_01673	0.56	+2.1
1,795,549	-		CCNA_01673	0.56	+1.9
1,795,559	-		CCNA_01673	0.57	+1.7
1,795,559	-		CCNA_01673	0.57	-1.0
1,795,585	+		CCNA_01673	0.60	+3.2
1,795,593	-		CCNA_01673	0.61	-1.8
1,795,629	+		CCNA_01673	0.64	-0.7
1,795,667	+		CCNA_01673	0.68	-0.7
1,795,667	+		CCNA_01673	0.68	+2.3
1,795,732	+		CCNA_01673	0.75	+2.3
1,795,738	-		CCNA_01673	0.76	+0.5
1,795,769	+		CCNA_01673	0.79	-1.6
1,795,795	+		CCNA_01673	0.82	+1.6
1,795,795	+		CCNA_01673	0.82	+0.6
1,795,803	-		CCNA_01673	0.83	+0.5
1,795,803	-		CCNA_01673	0.83	-0.4
1,795,833	-		CCNA_01673	0.86	+1.3
1,795,842	-		CCNA_01673	0.87	+1.9
1,795,861	-		CCNA_01673	0.89	-1.1
1,795,865	-		CCNA_01673	0.89	+0.5
1,795,868	+		CCNA_01673	0.90	+1.8
1,795,880	+				+1.3
1,795,888	-				+0.2
1,795,900	-				+1.7
1,795,936	-				-1.8
1,795,954	+				+2.5
1,795,985	-				+0.5
1,796,023	-				-0.3
1,796,025	-				-1.0
1,796,027	+				+1.7
1,796,035	-				+0.6
1,796,035	-				+0.5
1,796,053	-				-0.4
1,796,088	+				+0.9
1,796,089	-				+4.1
1,796,096	-				-2.2
1,796,123	-		CCNA_01674	0.11	+0.1
1,796,129	+		CCNA_01674	0.11	-0.8
1,796,130	-		CCNA_01674	0.11	-1.0
1,796,136	-		CCNA_01674	0.11	+3.8
1,796,144	+		CCNA_01674	0.12	-0.0
1,796,191	+		CCNA_01674	0.15	+0.5
1,796,199	-		CCNA_01674	0.16	-0.7
1,796,206	-		CCNA_01674	0.16	-0.4
1,796,215	+		CCNA_01674	0.17	-0.1
1,796,218	+		CCNA_01674	0.17	-0.6
1,796,218	+		CCNA_01674	0.17	+1.2
1,796,244	-		CCNA_01674	0.19	+1.1
1,796,244	-		CCNA_01674	0.19	+1.8
1,796,244	-		CCNA_01674	0.19	+1.0
1,796,275	-		CCNA_01674	0.21	+1.2
1,796,275	-		CCNA_01674	0.21	+0.1
1,796,323	+		CCNA_01674	0.24	+0.4
1,796,323	+		CCNA_01674	0.24	+2.9
1,796,331	-		CCNA_01674	0.24	-0.9
1,796,331	-		CCNA_01674	0.24	+0.8
1,796,331	-		CCNA_01674	0.24	-1.6
1,796,352	-		CCNA_01674	0.26	-1.1
1,796,357	-		CCNA_01674	0.26	+1.1
1,796,367	-		CCNA_01674	0.27	-1.6
1,796,411	-		CCNA_01674	0.30	+0.0
1,796,411	-		CCNA_01674	0.30	+1.0
1,796,454	+		CCNA_01674	0.32	+1.1
1,796,458	-		CCNA_01674	0.33	-0.8
1,796,462	-		CCNA_01674	0.33	-0.5
1,796,464	+		CCNA_01674	0.33	-0.1
1,796,469	+		CCNA_01674	0.33	-2.1
1,796,485	+		CCNA_01674	0.34	-0.8
1,796,488	-		CCNA_01674	0.35	+2.7
1,796,527	+		CCNA_01674	0.37	-0.6
1,796,527	+		CCNA_01674	0.37	-0.6
1,796,527	+		CCNA_01674	0.37	-0.7
1,796,527	+		CCNA_01674	0.37	+0.2
1,796,527	+		CCNA_01674	0.37	-0.3
1,796,535	-		CCNA_01674	0.38	+0.7
1,796,545	-		CCNA_01674	0.38	+0.2
1,796,620	+		CCNA_01674	0.43	-1.5
1,796,630	+		CCNA_01674	0.44	+1.0
1,796,630	+		CCNA_01674	0.44	+0.6
1,796,638	-		CCNA_01674	0.44	-0.9
1,796,654	-		CCNA_01674	0.45	+0.5
1,796,669	+		CCNA_01674	0.46	+0.2
1,796,742	+		CCNA_01674	0.51	-0.9
1,796,750	-		CCNA_01674	0.52	-1.7
1,796,750	-		CCNA_01674	0.52	-0.5
1,796,805	+		CCNA_01674	0.55	-0.2
1,796,805	+		CCNA_01674	0.55	-0.6
1,796,813	-		CCNA_01674	0.56	+0.2
1,796,830	+		CCNA_01674	0.57	+1.5
1,796,902	-		CCNA_01674	0.62	-1.0
1,796,904	+		CCNA_01674	0.62	-0.4
1,796,979	+		CCNA_01674	0.67	+0.1
1,796,991	+		CCNA_01674	0.68	-1.1
1,796,999	-		CCNA_01674	0.68	-0.1
1,797,022	+		CCNA_01674	0.70	+0.3
1,797,022	+		CCNA_01674	0.70	-2.5
1,797,023	+		CCNA_01674	0.70	-2.3
1,797,030	-		CCNA_01674	0.70	-1.1
1,797,065	+		CCNA_01674	0.73	-0.7
1,797,080	+		CCNA_01674	0.74	+1.9
1,797,159	-		CCNA_01674	0.79	-2.4
1,797,166	+		CCNA_01674	0.79	+0.8
1,797,174	-		CCNA_01674	0.80	+1.1
1,797,174	-		CCNA_01674	0.80	-0.4
1,797,174	-		CCNA_01674	0.80	-1.5
1,797,249	+		CCNA_01674	0.85	+0.6
1,797,257	+		CCNA_01674	0.85	+1.2
1,797,265	+		CCNA_01674	0.86	-0.0
1,797,279	-		CCNA_01674	0.87	+1.6
1,797,281	+		CCNA_01674	0.87	-0.7
1,797,348	+				-0.4
1,797,443	+				+0.3
1,797,444	+				-0.4
1,797,445	+				-0.1
1,797,459	-				-2.1
1,797,462	+				-0.4
1,797,462	+				-0.2
1,797,516	+				+0.7
1,797,516	+				+1.3
1,797,516	+				+0.5
1,797,516	+				+0.9
1,797,516	+				-1.4
1,797,523	+				-0.8
1,797,523	+				+2.1
1,797,524	-				-1.8
1,797,524	-				-0.3
1,797,524	-				-0.9
1,797,524	-				+1.8
1,797,524	-				+0.7
1,797,524	-				-1.7
1,797,524	-				+1.7
1,797,531	-				-1.5
1,797,531	-				+0.4
1,797,539	+				+1.3
1,797,540	+				-0.6
1,797,547	-				+0.8
1,797,620	+				-0.5
1,797,628	-				-1.6
1,797,628	-				+1.1
1,797,677	+				+0.8
1,797,689	-				-0.7
1,797,689	-				-1.5
1,797,753	+				-0.0
1,797,761	-				-1.0
1,797,761	-				-1.0