Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01672

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
1,793,044	-		CCNA_01670	0.58	+1.9
1,793,074	+		CCNA_01670	0.61	-0.7
1,793,074	+		CCNA_01670	0.61	+0.9
1,793,084	-		CCNA_01670	0.62	+0.9
1,793,108	+		CCNA_01670	0.65	+1.1
1,793,118	+		CCNA_01670	0.65	-0.0
1,793,118	+		CCNA_01670	0.65	+1.9
1,793,118	+		CCNA_01670	0.65	-1.1
1,793,126	-		CCNA_01670	0.66	+3.5
1,793,126	-		CCNA_01670	0.66	+0.6
1,793,126	-		CCNA_01670	0.66	-1.0
1,793,140	+		CCNA_01670	0.68	+0.8
1,793,182	+		CCNA_01670	0.72	-1.2
1,793,182	-		CCNA_01670	0.72	+3.2
1,793,195	-		CCNA_01670	0.73	-0.2
1,793,215	+		CCNA_01670	0.75	+0.7
1,793,224	+		CCNA_01670	0.76	-0.5
1,793,260	+		CCNA_01670	0.79	+2.3
1,793,297	-		CCNA_01670	0.83	-2.0
1,793,328	+		CCNA_01670	0.86	-1.0
1,793,328	+		CCNA_01670	0.86	+0.2
1,793,328	+		CCNA_01670	0.86	-0.9
1,793,328	+		CCNA_01670	0.86	+1.1
1,793,328	+		CCNA_01670	0.86	+0.2
1,793,328	+		CCNA_01670	0.86	-1.5
1,793,328	+		CCNA_01670	0.86	-0.7
1,793,336	-		CCNA_01670	0.87	-0.0
1,793,336	-		CCNA_01670	0.87	+2.7
1,793,336	-		CCNA_01670	0.87	-0.6
1,793,388	-				+4.4
1,793,404	+				+1.1
1,793,412	-				-2.1
1,793,412	-				+0.7
1,793,428	+				-0.6
1,793,436	-				-1.3
1,793,436	-				+3.1
1,793,455	-				+2.1
1,793,457	-				+0.2
1,793,457	-				-1.6
1,793,464	+				-1.3
1,793,519	+				-1.2
1,793,529	+				+0.6
1,793,582	+				+2.0
1,793,584	-				-0.8
1,793,687	-		CCNA_01671	0.32	-0.2
1,793,687	-		CCNA_01671	0.32	+4.4
1,793,691	+		CCNA_01671	0.33	-0.3
1,793,741	-		CCNA_01671	0.47	-0.7
1,793,820	+		CCNA_01671	0.69	+2.9
1,794,009	+				-0.5
1,794,017	-				-2.5
1,794,066	-				+0.7
1,794,068	-				+3.6
1,794,068	-				-0.4
1,794,070	+				+1.1
1,794,070	+				-0.3
1,794,163	+		CCNA_01672	0.14	+0.3
1,794,200	+		CCNA_01672	0.17	-0.9
1,794,202	+		CCNA_01672	0.18	-0.7
1,794,202	+		CCNA_01672	0.18	+1.9
1,794,227	-		CCNA_01672	0.20	-0.4
1,794,227	-		CCNA_01672	0.20	-1.1
1,794,236	+		CCNA_01672	0.21	-0.3
1,794,236	+		CCNA_01672	0.21	-0.9
1,794,244	-		CCNA_01672	0.22	-2.1
1,794,284	-		CCNA_01672	0.26	-1.1
1,794,292	+		CCNA_01672	0.27	+3.8
1,794,292	+		CCNA_01672	0.27	+0.8
1,794,300	-		CCNA_01672	0.28	-1.1
1,794,300	-		CCNA_01672	0.28	+2.1
1,794,321	-		CCNA_01672	0.30	-0.4
1,794,333	+		CCNA_01672	0.31	-1.1
1,794,333	+		CCNA_01672	0.31	-1.3
1,794,335	-		CCNA_01672	0.31	+0.2
1,794,338	+		CCNA_01672	0.32	-0.5
1,794,341	-		CCNA_01672	0.32	+1.5
1,794,341	-		CCNA_01672	0.32	-0.8
1,794,341	-		CCNA_01672	0.32	-1.0
1,794,346	-		CCNA_01672	0.32	+0.5
1,794,346	-		CCNA_01672	0.32	-0.6
1,794,346	-		CCNA_01672	0.32	+0.3
1,794,346	-		CCNA_01672	0.32	-1.4
1,794,346	-		CCNA_01672	0.32	+1.1
1,794,373	+		CCNA_01672	0.35	+0.9
1,794,389	-		CCNA_01672	0.37	-1.6
1,794,418	-		CCNA_01672	0.40	-0.0
1,794,427	-		CCNA_01672	0.41	-0.8
1,794,487	+		CCNA_01672	0.47	+1.7
1,794,543	+		CCNA_01672	0.53	-0.9
1,794,586	-		CCNA_01672	0.57	-1.0
1,794,635	+		CCNA_01672	0.62	-0.2
1,794,736	+		CCNA_01672	0.72	-0.8
1,794,800	-		CCNA_01672	0.79	-1.5
1,794,849	+		CCNA_01672	0.84	+1.3
1,794,862	-				+1.3
1,794,875	+		CCNA_01672	0.87	+0.7
1,794,883	-		CCNA_01672	0.87	+0.1
1,795,008	+				+2.0
1,795,016	-				+0.3
1,795,032	-				-0.3
1,795,043	-				-1.6
1,795,100	+				+0.1
1,795,131	+		CCNA_01673	0.12	+2.4
1,795,138	-		CCNA_01673	0.13	-0.8
1,795,156	+		CCNA_01673	0.15	-0.6
1,795,197	-		CCNA_01673	0.19	-0.9
1,795,210	+		CCNA_01673	0.20	+0.7
1,795,218	-		CCNA_01673	0.21	-1.6
1,795,235	-		CCNA_01673	0.23	-0.7
1,795,345	-		CCNA_01673	0.34	-2.0
1,795,377	-		CCNA_01673	0.38	+1.4
1,795,382	+		CCNA_01673	0.38	+0.3
1,795,387	+		CCNA_01673	0.39	-0.8
1,795,387	+		CCNA_01673	0.39	-0.9
1,795,390	-		CCNA_01673	0.39	-0.9
1,795,390	-		CCNA_01673	0.39	-1.7
1,795,395	-		CCNA_01673	0.40	+0.4
1,795,395	-		CCNA_01673	0.40	-1.2
1,795,395	-		CCNA_01673	0.40	+0.7
1,795,395	-		CCNA_01673	0.40	+0.3
1,795,395	-		CCNA_01673	0.40	-3.6
1,795,395	-		CCNA_01673	0.40	-0.9
1,795,493	+		CCNA_01673	0.50	-0.0
1,795,526	-		CCNA_01673	0.54	-2.0
1,795,528	+		CCNA_01673	0.54	-0.8
1,795,528	+		CCNA_01673	0.54	+2.1
1,795,536	-		CCNA_01673	0.55	-1.1
1,795,541	+		CCNA_01673	0.55	+1.7
1,795,541	+		CCNA_01673	0.55	-0.5
1,795,541	+		CCNA_01673	0.55	-0.6
1,795,549	-		CCNA_01673	0.56	+2.1
1,795,549	-		CCNA_01673	0.56	+1.9
1,795,559	-		CCNA_01673	0.57	+1.7
1,795,559	-		CCNA_01673	0.57	-1.0
1,795,585	+		CCNA_01673	0.60	+3.2
1,795,593	-		CCNA_01673	0.61	-1.8
1,795,629	+		CCNA_01673	0.64	-0.7
1,795,667	+		CCNA_01673	0.68	-0.7
1,795,667	+		CCNA_01673	0.68	+2.3
1,795,732	+		CCNA_01673	0.75	+2.3
1,795,738	-		CCNA_01673	0.76	+0.5
1,795,769	+		CCNA_01673	0.79	-1.6
1,795,795	+		CCNA_01673	0.82	+1.6
1,795,795	+		CCNA_01673	0.82	+0.6
1,795,803	-		CCNA_01673	0.83	+0.5
1,795,803	-		CCNA_01673	0.83	-0.4
1,795,833	-		CCNA_01673	0.86	+1.3
1,795,842	-		CCNA_01673	0.87	+1.9
1,795,861	-		CCNA_01673	0.89	-1.1
1,795,865	-		CCNA_01673	0.89	+0.5
1,795,868	+		CCNA_01673	0.90	+1.8
1,795,880	+				+1.3
1,795,888	-				+0.2
1,795,900	-				+1.7
1,795,936	-				-1.8
1,795,954	+				+2.5
1,795,985	-				+0.5