Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01533

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
1,641,370	+		CCNA_01532	0.70	-1.2
1,641,387	+		CCNA_01532	0.70	-3.9
1,641,402	+		CCNA_01532	0.71	+0.1
1,641,410	-		CCNA_01532	0.71	-1.0
1,641,410	-		CCNA_01532	0.71	+1.4
1,641,454	+		CCNA_01532	0.72	+0.8
1,641,494	+		CCNA_01532	0.74	-0.1
1,641,494	+		CCNA_01532	0.74	-2.6
1,641,494	+		CCNA_01532	0.74	+0.2
1,641,494	+		CCNA_01532	0.74	-1.0
1,641,502	-		CCNA_01532	0.74	-0.2
1,641,502	-		CCNA_01532	0.74	+2.7
1,641,516	+		CCNA_01532	0.75	-0.9
1,641,524	-		CCNA_01532	0.75	+1.6
1,641,524	-		CCNA_01532	0.75	+1.6
1,641,561	-		CCNA_01532	0.76	+0.9
1,641,584	-		CCNA_01532	0.77	-1.5
1,641,607	+		CCNA_01532	0.78	-1.2
1,641,607	+		CCNA_01532	0.78	+0.2
1,641,607	+		CCNA_01532	0.78	-0.6
1,641,634	+		CCNA_01532	0.79	+0.6
1,641,652	-		CCNA_01532	0.79	-0.2
1,641,698	-		CCNA_01532	0.81	+1.3
1,641,718	-		CCNA_01532	0.82	+2.4
1,641,773	+		CCNA_01532	0.84	+1.1
1,641,781	-		CCNA_01532	0.84	-1.5
1,641,784	+		CCNA_01532	0.84	-0.5
1,641,803	+		CCNA_01532	0.85	-1.0
1,641,811	-		CCNA_01532	0.85	+2.1
1,641,900	+		CCNA_01532	0.88	-2.7
1,641,917	+		CCNA_01532	0.89	+0.5
1,641,936	-		CCNA_01532	0.89	-1.2
1,641,959	+				-0.3
1,641,967	-				+1.0
1,641,988	-				+1.0
1,642,033	-				-0.5
1,642,041	+				-1.5
1,642,086	-				-1.9
1,642,089	+				-1.9
1,642,119	+				-0.1
1,642,119	+				-2.7
1,642,173	+				-1.2
1,642,173	+				-0.4
1,642,181	-				-1.5
1,642,205	+				-0.1
1,642,213	-				-1.2
1,642,223	-				+0.0
1,642,256	-				+1.0
1,642,308	-				+0.2
1,642,308	-				+0.0
1,642,366	+				+2.7
1,642,366	+				+0.3
1,642,366	+				+0.6
1,642,366	+				-0.1
1,642,366	+				-0.2
1,642,366	+				-0.3
1,642,441	+		CCNA_01533	0.20	-0.5
1,642,471	-		CCNA_01533	0.24	+0.3
1,642,487	+		CCNA_01533	0.27	+0.9
1,642,495	+		CCNA_01533	0.28	+2.1
1,642,503	-		CCNA_01533	0.29	+0.5
1,642,532	+		CCNA_01533	0.33	+0.6
1,642,550	-		CCNA_01533	0.36	+2.4
1,642,584	+		CCNA_01533	0.41	+2.2
1,642,605	-		CCNA_01533	0.44	-0.3
1,642,634	+		CCNA_01533	0.48	+1.9
1,642,639	+		CCNA_01533	0.49	-0.3
1,642,642	-		CCNA_01533	0.49	-2.9
1,642,706	-		CCNA_01533	0.58	+2.0
1,642,799	+		CCNA_01533	0.72	+1.0
1,642,799	+		CCNA_01533	0.72	+3.2
1,642,799	+		CCNA_01533	0.72	+1.2
1,642,804	+		CCNA_01533	0.73	-0.6
1,642,814	+		CCNA_01533	0.74	-0.1
1,642,832	-		CCNA_01533	0.77	-0.2
1,642,864	+		CCNA_01533	0.81	+0.0
1,642,866	+				+1.6
1,642,873	-		CCNA_01533	0.83	-0.0
1,642,957	-				-0.7
1,642,970	+				+0.2
1,642,970	+				+1.0
1,642,970	+				-0.4
1,642,970	+				+1.4
1,642,970	+				-3.1
1,642,978	-				-0.5
1,642,978	-				+0.5
1,643,037	+				-0.4
1,643,071	+		CCNA_01534	0.15	-1.9
1,643,076	+		CCNA_01534	0.17	-0.5
1,643,079	-		CCNA_01534	0.17	-1.2
1,643,198	+		CCNA_01534	0.47	-0.6
1,643,239	-		CCNA_01534	0.57	+0.0
1,643,274	+		CCNA_01534	0.66	-2.3
1,643,282	-		CCNA_01534	0.68	+0.3
1,643,305	+		CCNA_01534	0.74	-3.5
1,643,308	-		CCNA_01534	0.75	-1.5
1,643,308	-		CCNA_01534	0.75	+0.8
1,643,310	+		CCNA_01534	0.75	-3.5
1,643,343	+		CCNA_01534	0.83	+0.0
1,643,408	-				+0.6
1,643,421	+				-1.7
1,643,487	+				+1.2
1,643,655	+				-0.4