Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01038

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
1,132,013	-				-0.9
1,132,101	-				+0.9
1,132,145	+				+0.3
1,132,153	+				+2.5
1,132,153	+				-2.0
1,132,156	-				-0.8
1,132,238	+		CCNA_01037	0.14	-0.1
1,132,238	+		CCNA_01037	0.14	+3.1
1,132,238	+		CCNA_01037	0.14	-0.6
1,132,246	-		CCNA_01037	0.15	+0.4
1,132,300	-		CCNA_01037	0.22	-1.8
1,132,313	-		CCNA_01037	0.24	+2.4
1,132,342	+		CCNA_01037	0.28	+0.2
1,132,360	-		CCNA_01037	0.30	-3.2
1,132,372	+		CCNA_01037	0.32	-1.1
1,132,392	+		CCNA_01037	0.34	-0.1
1,132,393	-		CCNA_01037	0.35	+0.8
1,132,408	-		CCNA_01037	0.36	+0.5
1,132,418	-		CCNA_01037	0.38	-0.1
1,132,427	+		CCNA_01037	0.39	-0.5
1,132,543	-		CCNA_01037	0.54	-1.5
1,132,565	+		CCNA_01037	0.57	-1.1
1,132,565	+		CCNA_01037	0.57	-1.6
1,132,592	-		CCNA_01037	0.61	+0.9
1,132,596	-		CCNA_01037	0.61	-0.2
1,132,602	+		CCNA_01037	0.62	+0.5
1,132,612	+		CCNA_01037	0.63	-2.2
1,132,620	-		CCNA_01037	0.64	-1.9
1,132,703	-		CCNA_01037	0.75	-1.2
1,132,892	-				-0.8
1,132,892	-				+2.2
1,132,908	-				-0.5
1,132,913	-				-0.4
1,132,968	-				-0.2
1,132,988	+				+0.3
1,132,995	+				-1.1
1,133,003	-				-1.9
1,133,012	+				+1.1
1,133,070	-		CCNA_01038	0.18	-0.9
1,133,075	-		CCNA_01038	0.20	-1.0
1,133,075	-		CCNA_01038	0.20	+1.7
1,133,075	-		CCNA_01038	0.20	-2.2
1,133,093	+		CCNA_01038	0.24	-2.1
1,133,093	+		CCNA_01038	0.24	-1.0
1,133,093	+		CCNA_01038	0.24	-1.1
1,133,093	+		CCNA_01038	0.24	+1.9
1,133,093	+		CCNA_01038	0.24	+1.1
1,133,093	+		CCNA_01038	0.24	-3.1
1,133,093	+		CCNA_01038	0.24	+0.0
1,133,093	+		CCNA_01038	0.24	+0.7
1,133,101	-		CCNA_01038	0.26	+0.2
1,133,101	-		CCNA_01038	0.26	+4.0
1,133,101	-		CCNA_01038	0.26	-1.1
1,133,101	-		CCNA_01038	0.26	+0.0
1,133,101	-		CCNA_01038	0.26	+0.1
1,133,101	-		CCNA_01038	0.26	-0.4
1,133,101	-		CCNA_01038	0.26	-0.2
1,133,104	+		CCNA_01038	0.27	+0.7
1,133,112	-		CCNA_01038	0.29	+3.3
1,133,112	-		CCNA_01038	0.29	+0.2
1,133,112	-		CCNA_01038	0.29	-0.4
1,133,112	-		CCNA_01038	0.29	-1.6
1,133,112	-		CCNA_01038	0.29	+1.6
1,133,218	+		CCNA_01038	0.56	+0.9
1,133,226	-		CCNA_01038	0.58	+1.1
1,133,245	+		CCNA_01038	0.63	+0.3
1,133,325	-		CCNA_01038	0.84	-0.6
1,133,337	+		CCNA_01038	0.87	-0.4
1,133,338	+		CCNA_01038	0.87	+0.3
1,133,339	+		CCNA_01038	0.87	-1.1
1,133,344	+		CCNA_01038	0.89	+1.9
1,133,347	-		CCNA_01038	0.89	+4.0
1,133,356	-				+1.0
1,133,364	+				-1.7
1,133,366	+				+0.5
1,133,370	-				-1.8
1,133,377	-				-0.6
1,133,380	-				+0.8
1,133,413	+				-0.3
1,133,421	-				+0.1
1,133,477	-				-1.3
1,133,479	+				+1.9
1,133,484	+				+0.6
1,133,484	+				+1.5
1,133,492	-				+2.0
1,133,492	-				+2.3
1,133,499	+				+0.5
1,133,507	-				-2.6
1,133,509	-				-1.2
1,133,512	-				-1.7
1,133,678	+				-1.1
1,133,678	+				-1.6
1,133,685	+				+1.6
1,133,693	-				+2.3
1,133,777	+		CCNA_01039	0.12	+0.2
1,133,777	+		CCNA_01039	0.12	+1.8
1,133,785	-		CCNA_01039	0.13	-0.1
1,133,789	+		CCNA_01039	0.13	+2.2
1,133,791	+		CCNA_01039	0.13	+0.0
1,133,835	-		CCNA_01039	0.17	+0.3
1,133,876	-		CCNA_01039	0.20	-1.6
1,133,878	+		CCNA_01039	0.20	+0.7
1,133,878	+		CCNA_01039	0.20	-0.9
1,133,878	+		CCNA_01039	0.20	-0.5
1,133,878	+		CCNA_01039	0.20	-0.0
1,133,878	+		CCNA_01039	0.20	+1.6
1,133,878	+		CCNA_01039	0.20	-0.5
1,133,878	+		CCNA_01039	0.20	-2.0
1,133,885	-		CCNA_01039	0.20	-0.5
1,133,923	-		CCNA_01039	0.23	+2.3
1,133,948	+		CCNA_01039	0.25	+0.3
1,133,958	+		CCNA_01039	0.26	+2.9
1,133,965	+		CCNA_01039	0.26	+0.3
1,133,973	+		CCNA_01039	0.27	-2.5
1,133,991	-		CCNA_01039	0.28	-0.1
1,134,005	-		CCNA_01039	0.30	-2.0
1,134,023	+		CCNA_01039	0.31	+1.1
1,134,023	+		CCNA_01039	0.31	-1.0
1,134,023	+		CCNA_01039	0.31	-0.4
1,134,031	-		CCNA_01039	0.32	+0.0
1,134,031	-		CCNA_01039	0.32	-1.1
1,134,031	-		CCNA_01039	0.32	+1.2
1,134,057	+		CCNA_01039	0.33	-2.3
1,134,057	+		CCNA_01039	0.33	+1.3
1,134,103	+		CCNA_01039	0.37	-0.6
1,134,108	+		CCNA_01039	0.37	-1.2
1,134,108	+		CCNA_01039	0.37	-2.4
1,134,116	-		CCNA_01039	0.38	-0.2
1,134,116	-		CCNA_01039	0.38	+0.7
1,134,128	+		CCNA_01039	0.39	-0.7
1,134,136	-		CCNA_01039	0.39	+1.9
1,134,136	-		CCNA_01039	0.39	+1.5
1,134,138	+		CCNA_01039	0.40	-1.7
1,134,151	-		CCNA_01039	0.41	-0.1
1,134,151	-		CCNA_01039	0.41	-0.6
1,134,170	-		CCNA_01039	0.42	-1.9
1,134,186	+		CCNA_01039	0.43	+1.0
1,134,191	+		CCNA_01039	0.44	-1.0
1,134,191	+		CCNA_01039	0.44	-0.5
1,134,191	+		CCNA_01039	0.44	-1.0
1,134,191	+		CCNA_01039	0.44	-1.4
1,134,191	+		CCNA_01039	0.44	-1.0
1,134,199	-		CCNA_01039	0.44	-1.1
1,134,199	-		CCNA_01039	0.44	-1.2
1,134,199	-		CCNA_01039	0.44	+0.9
1,134,199	-		CCNA_01039	0.44	+0.9
1,134,199	-		CCNA_01039	0.44	+0.3
1,134,199	-		CCNA_01039	0.44	-2.0
1,134,204	-		CCNA_01039	0.45	-1.7
1,134,252	+		CCNA_01039	0.48	-2.9
1,134,294	+		CCNA_01039	0.51	-1.9
1,134,314	+		CCNA_01039	0.53	+0.1
1,134,322	-		CCNA_01039	0.54	+0.2
1,134,347	+		CCNA_01039	0.56	-0.6
1,134,347	+		CCNA_01039	0.56	-0.2
1,134,347	+		CCNA_01039	0.56	+0.3
1,134,347	+		CCNA_01039	0.56	-0.6
1,134,350	-		CCNA_01039	0.56	-1.5
1,134,355	-		CCNA_01039	0.56	-0.4
1,134,355	-		CCNA_01039	0.56	+2.7
1,134,355	-		CCNA_01039	0.56	+0.7
1,134,355	-		CCNA_01039	0.56	-0.1
1,134,355	-		CCNA_01039	0.56	-0.8
1,134,355	-		CCNA_01039	0.56	-0.1
1,134,355	-		CCNA_01039	0.56	+0.3
1,134,355	-		CCNA_01039	0.56	-1.6
1,134,355	-		CCNA_01039	0.56	-0.4
1,134,371	+		CCNA_01039	0.57	-0.3
1,134,381	+		CCNA_01039	0.58	-1.7