Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00101

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
110,786	+		CCNA_00099	0.89	-2.3
110,786	+		CCNA_00099	0.89	+0.6
110,794	-		CCNA_00099	0.90	-1.2
110,794	-		CCNA_00099	0.90	+0.2
110,815	+				-1.8
110,815	+				-2.0
110,838	-				-0.8
110,860	-				-0.6
110,904	+				-1.1
110,907	-				-3.3
110,907	-				+0.2
110,940	-				-1.2
111,634	+				-3.1
111,642	-				-2.5
111,654	+				-0.1
111,655	+				-3.2
111,719	+				+1.8
111,767	-				+1.6
111,798	+				-1.2
111,828	+				+2.6
111,832	-				+0.1
111,836	-				-1.9
111,836	-				+1.7
111,841	-				-2.2
111,843	+				-1.5
111,925	-		CCNA_00101	0.14	-4.0
111,925	-		CCNA_00101	0.14	-0.7
111,929	+		CCNA_00101	0.14	-0.4
112,013	+		CCNA_00101	0.21	-1.1
112,069	-		CCNA_00101	0.25	+1.3
112,143	-		CCNA_00101	0.31	+1.1
112,156	-		CCNA_00101	0.32	-0.6
112,211	-		CCNA_00101	0.36	-1.5
112,247	+		CCNA_00101	0.39	-0.9
112,255	-		CCNA_00101	0.40	-1.5
112,301	+		CCNA_00101	0.43	+1.1
112,369	+		CCNA_00101	0.48	-1.6
112,369	+		CCNA_00101	0.48	-0.0
112,369	+		CCNA_00101	0.48	+2.9
112,429	-		CCNA_00101	0.53	-1.9
112,434	+		CCNA_00101	0.53	-3.7
112,458	-		CCNA_00101	0.55	+2.7
112,458	-		CCNA_00101	0.55	+1.7
112,473	-		CCNA_00101	0.56	+1.0
112,494	-		CCNA_00101	0.58	-1.3
112,494	-		CCNA_00101	0.58	-0.3
112,496	+		CCNA_00101	0.58	+1.5
112,496	+		CCNA_00101	0.58	-1.8
112,515	+		CCNA_00101	0.60	-1.4
112,532	+		CCNA_00101	0.61	-0.5
112,624	-		CCNA_00101	0.68	-0.3
112,667	+		CCNA_00101	0.71	+0.9
112,667	+		CCNA_00101	0.71	-0.1
112,667	+		CCNA_00101	0.71	-2.4
112,672	+		CCNA_00101	0.72	-1.0
112,675	-		CCNA_00101	0.72	-1.8
112,675	-		CCNA_00101	0.72	-1.4
112,675	-		CCNA_00101	0.72	-0.9
112,726	+		CCNA_00101	0.76	-0.5
112,727	-		CCNA_00101	0.76	-1.4
112,744	+		CCNA_00101	0.77	-2.9
112,760	-		CCNA_00101	0.79	-2.0
112,760	-		CCNA_00101	0.79	-1.5
112,760	-		CCNA_00101	0.79	-1.1
112,765	+		CCNA_00101	0.79	-2.5
112,766	-		CCNA_00101	0.79	+0.6
112,825	-		CCNA_00101	0.84	+0.0
112,838	-		CCNA_00101	0.85	+1.0
112,851	+		CCNA_00101	0.86	-0.5
112,851	+		CCNA_00101	0.86	-1.5
112,858	-		CCNA_00101	0.86	-3.7
112,859	-		CCNA_00101	0.86	-0.7
112,859	-		CCNA_00101	0.86	-3.8
112,859	-		CCNA_00101	0.86	-1.6
112,859	-		CCNA_00101	0.86	-0.3
112,859	-		CCNA_00101	0.86	+0.6
112,859	-		CCNA_00101	0.86	+0.9
112,859	-		CCNA_00101	0.86	-2.9
112,859	-		CCNA_00101	0.86	-1.8
112,871	+		CCNA_00101	0.87	-2.0
112,871	+		CCNA_00101	0.87	+0.1
112,871	+		CCNA_00101	0.87	-1.2
112,871	+		CCNA_00101	0.87	-2.2
112,871	+		CCNA_00101	0.87	-2.0
112,871	+		CCNA_00101	0.87	-1.5
112,879	-		CCNA_00101	0.88	-4.1
112,879	-		CCNA_00101	0.88	-1.0
112,879	-		CCNA_00101	0.88	-1.2
112,879	-		CCNA_00101	0.88	+1.8
112,879	-		CCNA_00101	0.88	-1.1
112,879	-		CCNA_00101	0.88	-1.5
112,879	-		CCNA_00101	0.88	-2.2
112,879	-		CCNA_00101	0.88	-0.8
112,879	-		CCNA_00101	0.88	-0.1
112,906	-				-2.7
112,908	+				-0.2
112,908	+				-1.4
112,916	-				+2.6
112,916	-				-3.0
112,916	-				+0.6
112,916	-				+2.7
112,916	-				-1.4
112,916	-				-1.3
112,944	+				+0.1
112,953	-				+0.3
112,963	+				-2.1
112,968	+				+0.4
112,984	+				+0.3
112,984	+				-0.7
112,991	-				-1.2
112,991	-				-0.9
112,997	-				-1.9
113,018	-				+1.4
113,022	+				-0.4
113,022	+				-1.1
113,030	-				-1.1
113,030	-				+0.3
113,030	-				-1.3
113,030	-				+0.6
113,054	-				-2.0
113,077	-				+1.5
113,080	+				+0.1
113,099	+				-0.2
113,176	-		CCNA_00102	0.11	+0.5
113,185	+		CCNA_00102	0.15	+0.6
113,201	-		CCNA_00102	0.22	+1.3
113,217	+		CCNA_00102	0.29	+0.4
113,218	-		CCNA_00102	0.30	+0.7
113,225	-		CCNA_00102	0.33	-1.5
113,225	-		CCNA_00102	0.33	+2.8
113,225	-		CCNA_00102	0.33	+0.1
113,225	-		CCNA_00102	0.33	+0.3
113,225	-		CCNA_00102	0.33	+0.6
113,225	-		CCNA_00102	0.33	-2.6
113,280	+		CCNA_00102	0.57	+0.0
113,317	+		CCNA_00102	0.74	+0.5
113,317	+		CCNA_00102	0.74	-1.4
113,317	+		CCNA_00102	0.74	-1.0
113,317	+		CCNA_00102	0.74	-0.4
113,377	+				-1.8
113,389	+				+0.5
113,461	+				-0.7
113,469	-				-1.5
113,469	-				+3.5
113,478	+				-0.1
113,585	+				-0.8
113,590	+				+0.1
113,658	+		CCNA_00103	0.11	-1.2
113,681	+		CCNA_00103	0.13	+0.2
113,682	+		CCNA_00103	0.13	-1.4
113,750	+		CCNA_00103	0.17	-0.2
113,758	+		CCNA_00103	0.17	-1.1
113,766	-		CCNA_00103	0.18	-1.0
113,770	-		CCNA_00103	0.18	-0.2
113,797	-		CCNA_00103	0.20	+1.0
113,800	+		CCNA_00103	0.20	+0.9
113,828	+		CCNA_00103	0.21	-0.1
113,828	+		CCNA_00103	0.21	+0.1
113,828	+		CCNA_00103	0.21	-2.4
113,836	-		CCNA_00103	0.22	-1.0
113,836	-		CCNA_00103	0.22	-1.2
113,854	+		CCNA_00103	0.23	-2.3
113,880	+		CCNA_00103	0.25	-2.6
113,896	+		CCNA_00103	0.26	-1.5
113,899	-		CCNA_00103	0.26	-0.6
113,899	-		CCNA_00103	0.26	-0.0
113,904	-		CCNA_00103	0.26	-0.5
113,915	-		CCNA_00103	0.27	-2.1
113,921	+		CCNA_00103	0.27	-1.0
113,929	-		CCNA_00103	0.27	+0.3
113,929	-		CCNA_00103	0.27	-0.2
113,929	-		CCNA_00103	0.27	-0.6
113,929	-		CCNA_00103	0.27	-0.5
113,934	+		CCNA_00103	0.28	+1.9
113,934	+		CCNA_00103	0.28	+0.2
113,942	-		CCNA_00103	0.28	+1.5
113,954	-		CCNA_00103	0.29	+1.8
113,982	-		CCNA_00103	0.31	-0.5
114,015	+		CCNA_00103	0.33	-0.1