Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07910

Experiment: rhizosphere sample 2; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere sample 2; outgrowth in LB
1,680,249	+				-0.0
1,680,249	+				+0.2
1,680,250	-				+0.5
1,680,250	-				+0.8
1,680,250	-				-1.7
1,680,251	-				+0.9
1,680,340	-				-2.7
1,680,582	+		ABZR87_RS07905	0.36	+0.8
1,680,582	+		ABZR87_RS07905	0.36	+2.1
1,680,582	+		ABZR87_RS07905	0.36	+0.7
1,680,583	-		ABZR87_RS07905	0.37	-0.5
1,680,765	+		ABZR87_RS07905	0.64	+2.2
1,680,766	-		ABZR87_RS07905	0.64	+0.7
1,680,766	-		ABZR87_RS07905	0.64	-0.4
1,680,766	-		ABZR87_RS07905	0.64	-1.1
1,680,766	-		ABZR87_RS07905	0.64	+0.1
1,680,766	-		ABZR87_RS07905	0.64	-0.8
1,680,766	-		ABZR87_RS07905	0.64	-1.5
1,680,807	+		ABZR87_RS07905	0.70	+0.5
1,680,807	+		ABZR87_RS07905	0.70	+0.4
1,680,808	-		ABZR87_RS07905	0.70	-2.5
1,680,808	-		ABZR87_RS07905	0.70	+0.9
1,680,808	-		ABZR87_RS07905	0.70	-0.3
1,680,814	-		ABZR87_RS07905	0.71	-1.0
1,680,851	+		ABZR87_RS07905	0.77	-1.0
1,680,852	-		ABZR87_RS07905	0.77	+1.3
1,680,852	-		ABZR87_RS07905	0.77	+1.5
1,680,853	-		ABZR87_RS07905	0.77	-0.3
1,680,955	-				-1.2
1,681,012	+				+0.0
1,681,234	+				+1.2
1,681,363	+		ABZR87_RS07910	0.16	-0.0
1,681,423	+		ABZR87_RS07910	0.20	-1.5
1,681,423	+		ABZR87_RS07910	0.20	-0.9
1,681,423	+		ABZR87_RS07910	0.20	+0.1
1,681,424	-		ABZR87_RS07910	0.20	-0.3
1,681,588	+		ABZR87_RS07910	0.31	-3.0
1,681,588	+		ABZR87_RS07910	0.31	+1.0
1,681,589	-		ABZR87_RS07910	0.31	-1.6
1,681,589	-		ABZR87_RS07910	0.31	+0.7
1,681,589	-		ABZR87_RS07910	0.31	-0.3
1,681,589	-		ABZR87_RS07910	0.31	-0.4
1,681,604	-		ABZR87_RS07910	0.32	+1.1
1,681,604	-		ABZR87_RS07910	0.32	-1.1
1,681,607	-		ABZR87_RS07910	0.32	-2.2
1,681,607	-		ABZR87_RS07910	0.32	-0.1
1,681,607	-		ABZR87_RS07910	0.32	+0.8
1,681,607	-		ABZR87_RS07910	0.32	-0.0
1,681,612	+		ABZR87_RS07910	0.32	-0.1
1,681,613	-		ABZR87_RS07910	0.32	-1.6
1,681,613	-		ABZR87_RS07910	0.32	+0.5
1,681,702	+		ABZR87_RS07910	0.38	+0.2
1,681,703	-		ABZR87_RS07910	0.38	-1.5
1,681,813	+		ABZR87_RS07910	0.45	-0.5
1,681,813	+		ABZR87_RS07910	0.45	-1.3
1,681,813	+		ABZR87_RS07910	0.45	+0.4
1,681,813	+		ABZR87_RS07910	0.45	+0.7
1,681,813	+		ABZR87_RS07910	0.45	-1.6
1,681,814	-		ABZR87_RS07910	0.45	+0.2
1,681,814	-		ABZR87_RS07910	0.45	-1.2
1,681,814	-		ABZR87_RS07910	0.45	+0.9
1,681,814	-		ABZR87_RS07910	0.45	-1.2
1,681,814	-		ABZR87_RS07910	0.45	+0.6
1,681,814	-		ABZR87_RS07910	0.45	+0.5
1,681,924	+		ABZR87_RS07910	0.52	+0.7
1,681,924	+		ABZR87_RS07910	0.52	-0.4
1,681,924	+		ABZR87_RS07910	0.52	+0.7
1,681,924	+		ABZR87_RS07910	0.52	-0.7
1,681,924	+		ABZR87_RS07910	0.52	-0.1
1,681,924	+		ABZR87_RS07910	0.52	-0.3
1,681,924	+		ABZR87_RS07910	0.52	-2.6
1,681,925	-		ABZR87_RS07910	0.52	-0.3
1,681,925	-		ABZR87_RS07910	0.52	-0.1
1,681,925	-		ABZR87_RS07910	0.52	-0.0
1,681,925	-		ABZR87_RS07910	0.52	-0.4
1,681,925	-		ABZR87_RS07910	0.52	-0.5
1,681,925	-		ABZR87_RS07910	0.52	-0.6
1,681,925	-		ABZR87_RS07910	0.52	-0.4
1,681,931	-		ABZR87_RS07910	0.53	-1.1
1,681,931	-		ABZR87_RS07910	0.53	-0.1
1,681,931	-		ABZR87_RS07910	0.53	+0.7
1,682,038	+		ABZR87_RS07910	0.60	-1.2
1,682,039	-		ABZR87_RS07910	0.60	+1.4
1,682,039	-		ABZR87_RS07910	0.60	-0.9
1,682,287	+		ABZR87_RS07910	0.76	+0.1
1,682,287	+		ABZR87_RS07910	0.76	-0.2
1,682,287	+		ABZR87_RS07910	0.76	+0.1
1,682,287	+		ABZR87_RS07910	0.76	+0.9
1,682,287	+		ABZR87_RS07910	0.76	-0.3
1,682,287	+		ABZR87_RS07910	0.76	-2.2
1,682,287	+		ABZR87_RS07910	0.76	+0.6
1,682,287	+		ABZR87_RS07910	0.76	+0.6
1,682,288	-		ABZR87_RS07910	0.76	-3.1
1,682,302	+		ABZR87_RS07910	0.77	-0.2
1,682,303	-		ABZR87_RS07910	0.77	+4.4
1,682,339	-		ABZR87_RS07910	0.79	-2.6
1,682,340	+		ABZR87_RS07910	0.79	+0.4
1,682,341	-		ABZR87_RS07910	0.79	+1.1
1,682,341	-		ABZR87_RS07910	0.79	+1.3
1,682,383	+		ABZR87_RS07910	0.82	-0.2
1,682,383	+		ABZR87_RS07910	0.82	+0.1
1,682,384	-		ABZR87_RS07910	0.82	-0.4
1,682,384	-		ABZR87_RS07910	0.82	-2.1
1,682,384	-		ABZR87_RS07910	0.82	+0.6
1,682,428	-		ABZR87_RS07910	0.85	+0.6
1,682,563	+				+0.3
1,682,563	+				+1.4
1,682,563	+				-0.2
1,682,564	-				-0.2
1,682,564	-				-0.2
1,682,662	+				-0.9
1,682,687	+				-1.1
1,682,687	+				+1.1
1,682,687	+				-1.0
1,682,687	+				+1.5
1,682,687	+				+0.0
1,682,688	-				-0.2
1,682,688	-				-0.5
1,682,688	-				-0.8
1,682,688	-				+0.4
1,682,688	-				-0.3
1,682,826	+		ABZR87_RS07915	0.14	+0.7
1,682,826	+		ABZR87_RS07915	0.14	+0.1
1,682,826	+		ABZR87_RS07915	0.14	-1.0
1,682,827	-		ABZR87_RS07915	0.15	+1.8
1,682,827	-		ABZR87_RS07915	0.15	+2.1
1,682,827	-		ABZR87_RS07915	0.15	-1.0
1,682,827	-		ABZR87_RS07915	0.15	-1.0
1,682,827	-		ABZR87_RS07915	0.15	+0.4
1,682,898	+		ABZR87_RS07915	0.22	-0.3
1,682,996	+		ABZR87_RS07915	0.32	+1.1
1,682,996	+		ABZR87_RS07915	0.32	-0.2
1,682,997	-		ABZR87_RS07915	0.32	-0.6
1,682,997	-		ABZR87_RS07915	0.32	-1.2
1,682,997	-		ABZR87_RS07915	0.32	+1.6
1,682,997	-		ABZR87_RS07915	0.32	+0.3
1,682,997	-		ABZR87_RS07915	0.32	-0.3
1,683,000	+		ABZR87_RS07915	0.33	+0.0
1,683,001	-		ABZR87_RS07915	0.33	-0.5
1,683,001	-		ABZR87_RS07915	0.33	-0.8
1,683,363	+		ABZR87_RS07915	0.71	+1.0
1,683,364	-		ABZR87_RS07915	0.71	+0.5
1,683,364	-		ABZR87_RS07915	0.71	-0.9
1,683,456	+		ABZR87_RS07915	0.80	-0.0
1,683,456	+		ABZR87_RS07915	0.80	-0.5
1,683,456	+		ABZR87_RS07915	0.80	+0.1
1,683,457	-		ABZR87_RS07915	0.80	+1.6
1,683,457	-		ABZR87_RS07915	0.80	-0.1
1,683,554	+				+0.8
1,683,554	+				-0.5
1,683,554	+				+0.8
1,683,554	+				-1.5
1,683,555	-				-1.1
1,683,555	-				+0.3
1,683,555	-				-1.6
1,683,555	-				+0.4
1,683,555	-				-1.3
1,683,642	+				-0.2
1,683,643	-				+0.9