Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2410

Experiment: Nalidixic 0.0078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.0078125 mg/ml
2,482,876	+				-0.3
2,482,986	+				+2.3
2,483,018	+				-0.3
2,483,036	-				-2.3
2,483,046	-				-1.3
2,483,119	+		Synpcc7942_2410	0.12	+3.3
2,483,119	+		Synpcc7942_2410	0.12	-1.9
2,483,119	+		Synpcc7942_2410	0.12	+1.3
2,483,119	+		Synpcc7942_2410	0.12	-0.3
2,483,119	+		Synpcc7942_2410	0.12	+0.5
2,483,119	+		Synpcc7942_2410	0.12	+2.7
2,483,119	+		Synpcc7942_2410	0.12	+0.3
2,483,119	+		Synpcc7942_2410	0.12	-1.3
2,483,119	+		Synpcc7942_2410	0.12	-2.3
2,483,119	+		Synpcc7942_2410	0.12	-1.3
2,483,119	+		Synpcc7942_2410	0.12	+1.5
2,483,119	+		Synpcc7942_2410	0.12	+2.3
2,483,119	+		Synpcc7942_2410	0.12	+0.3
2,483,119	+		Synpcc7942_2410	0.12	-2.7
2,483,119	+		Synpcc7942_2410	0.12	-1.3
2,483,119	+		Synpcc7942_2410	0.12	+0.2
2,483,119	+		Synpcc7942_2410	0.12	-2.3
2,483,119	+		Synpcc7942_2410	0.12	-1.3
2,483,119	+		Synpcc7942_2410	0.12	-1.3
2,483,119	+		Synpcc7942_2410	0.12	+2.7
2,483,119	+		Synpcc7942_2410	0.12	+4.1
2,483,119	+		Synpcc7942_2410	0.12	-0.3
2,483,119	+		Synpcc7942_2410	0.12	+2.5
2,483,119	+		Synpcc7942_2410	0.12	+2.9
2,483,119	+		Synpcc7942_2410	0.12	+2.5
2,483,119	+		Synpcc7942_2410	0.12	+2.5
2,483,119	+		Synpcc7942_2410	0.12	+3.5
2,483,119	+		Synpcc7942_2410	0.12	-1.3
2,483,127	-		Synpcc7942_2410	0.13	+0.7
2,483,127	-		Synpcc7942_2410	0.13	-1.1
2,483,127	-		Synpcc7942_2410	0.13	-1.9
2,483,127	-		Synpcc7942_2410	0.13	-0.3
2,483,127	-		Synpcc7942_2410	0.13	+1.2
2,483,127	-		Synpcc7942_2410	0.13	+1.0
2,483,127	-		Synpcc7942_2410	0.13	+1.7
2,483,127	-		Synpcc7942_2410	0.13	-1.3
2,483,127	-		Synpcc7942_2410	0.13	-0.3
2,483,127	-		Synpcc7942_2410	0.13	-2.3
2,483,127	-		Synpcc7942_2410	0.13	+2.8
2,483,127	-		Synpcc7942_2410	0.13	+2.8
2,483,127	-		Synpcc7942_2410	0.13	-0.9
2,483,127	-		Synpcc7942_2410	0.13	+0.7
2,483,127	-		Synpcc7942_2410	0.13	-1.9
2,483,127	-		Synpcc7942_2410	0.13	+2.3
2,483,127	-		Synpcc7942_2410	0.13	+0.3
2,483,127	-		Synpcc7942_2410	0.13	+4.2
2,483,127	-		Synpcc7942_2410	0.13	+1.0
2,483,127	-		Synpcc7942_2410	0.13	+1.4
2,483,131	+		Synpcc7942_2410	0.14	-1.1
2,483,131	+		Synpcc7942_2410	0.14	-0.2
2,483,170	-		Synpcc7942_2410	0.17	+2.1
2,483,201	+		Synpcc7942_2410	0.20	-1.7
2,483,203	+		Synpcc7942_2410	0.20	-2.3
2,483,203	+		Synpcc7942_2410	0.20	+5.2
2,483,203	+		Synpcc7942_2410	0.20	+1.3
2,483,203	+		Synpcc7942_2410	0.20	-0.3
2,483,203	+		Synpcc7942_2410	0.20	-2.3
2,483,211	-		Synpcc7942_2410	0.21	-0.3
2,483,211	-		Synpcc7942_2410	0.21	+0.4
2,483,211	-		Synpcc7942_2410	0.21	+2.7
2,483,211	-		Synpcc7942_2410	0.21	+1.8
2,483,216	-		Synpcc7942_2410	0.22	+3.2
2,483,234	+		Synpcc7942_2410	0.23	+1.7
2,483,234	+		Synpcc7942_2410	0.23	-1.3
2,483,234	+		Synpcc7942_2410	0.23	-0.0
2,483,242	-		Synpcc7942_2410	0.24	+1.5
2,483,242	-		Synpcc7942_2410	0.24	+2.8
2,483,242	-		Synpcc7942_2410	0.24	-0.3
2,483,251	-				+2.0
2,483,259	+		Synpcc7942_2410	0.26	+3.0
2,483,259	+		Synpcc7942_2410	0.26	+1.7
2,483,267	-		Synpcc7942_2410	0.27	-1.3
2,483,267	-		Synpcc7942_2410	0.27	+3.3
2,483,267	-		Synpcc7942_2410	0.27	+2.1
2,483,269	+		Synpcc7942_2410	0.27	+0.2
2,483,269	+		Synpcc7942_2410	0.27	+0.7
2,483,277	-		Synpcc7942_2410	0.28	-0.3
2,483,285	-		Synpcc7942_2410	0.28	-0.3
2,483,295	+		Synpcc7942_2410	0.29	-1.3
2,483,295	+		Synpcc7942_2410	0.29	-1.7
2,483,295	+		Synpcc7942_2410	0.29	+1.8
2,483,295	+		Synpcc7942_2410	0.29	+0.3
2,483,303	-		Synpcc7942_2410	0.30	+0.1
2,483,303	-		Synpcc7942_2410	0.30	-0.9
2,483,303	-		Synpcc7942_2410	0.30	+1.3
2,483,303	-		Synpcc7942_2410	0.30	+0.4
2,483,303	-		Synpcc7942_2410	0.30	+3.9
2,483,303	-		Synpcc7942_2410	0.30	+0.2
2,483,305	+		Synpcc7942_2410	0.30	+1.3
2,483,305	+		Synpcc7942_2410	0.30	-1.3
2,483,305	+		Synpcc7942_2410	0.30	-0.9
2,483,305	+		Synpcc7942_2410	0.30	-1.3
2,483,308	-		Synpcc7942_2410	0.31	+3.9
2,483,313	-		Synpcc7942_2410	0.31	-0.3
2,483,313	-		Synpcc7942_2410	0.31	-1.3
2,483,313	-		Synpcc7942_2410	0.31	+3.3
2,483,313	-		Synpcc7942_2410	0.31	-1.3
2,483,318	+		Synpcc7942_2410	0.32	+1.0
2,483,319	-		Synpcc7942_2410	0.32	-1.3
2,483,324	+		Synpcc7942_2410	0.32	+2.9
2,483,339	+		Synpcc7942_2410	0.34	+3.0
2,483,339	+				+1.7
2,483,341	+		Synpcc7942_2410	0.34	-0.3
2,483,342	+		Synpcc7942_2410	0.34	+2.6
2,483,342	-		Synpcc7942_2410	0.34	-1.9
2,483,349	-		Synpcc7942_2410	0.35	-0.3
2,483,357	-		Synpcc7942_2410	0.35	-0.3
2,483,389	-				-0.3
2,483,394	+		Synpcc7942_2410	0.39	-0.1
2,483,414	-		Synpcc7942_2410	0.41	+2.4
2,483,415	+				+1.3
2,483,416	-		Synpcc7942_2410	0.41	+0.3
2,483,422	+		Synpcc7942_2410	0.42	-1.9
2,483,430	-		Synpcc7942_2410	0.42	-0.3
2,483,455	-		Synpcc7942_2410	0.45	+1.3
2,483,464	-		Synpcc7942_2410	0.46	+2.4
2,483,490	+		Synpcc7942_2410	0.48	+3.3
2,483,490	+		Synpcc7942_2410	0.48	-1.3
2,483,490	+		Synpcc7942_2410	0.48	-2.3
2,483,498	-		Synpcc7942_2410	0.49	-0.5
2,483,509	+		Synpcc7942_2410	0.50	-0.3
2,483,509	+		Synpcc7942_2410	0.50	+1.7
2,483,509	+		Synpcc7942_2410	0.50	+1.0
2,483,514	+				-0.3
2,483,517	-		Synpcc7942_2410	0.51	+3.1
2,483,517	-		Synpcc7942_2410	0.51	+1.5
2,483,517	-		Synpcc7942_2410	0.51	-0.3
2,483,517	-		Synpcc7942_2410	0.51	+1.0
2,483,517	-		Synpcc7942_2410	0.51	+2.0
2,483,517	-		Synpcc7942_2410	0.51	+2.5
2,483,531	-		Synpcc7942_2410	0.52	-1.3
2,483,583	-		Synpcc7942_2410	0.57	-0.3
2,483,600	+		Synpcc7942_2410	0.59	-3.1
2,483,660	-		Synpcc7942_2410	0.65	-1.1
2,483,671	-		Synpcc7942_2410	0.66	+2.0
2,483,673	+		Synpcc7942_2410	0.66	+2.8
2,483,699	+		Synpcc7942_2410	0.68	+0.3
2,483,712	+		Synpcc7942_2410	0.70	+2.3
2,483,712	+		Synpcc7942_2410	0.70	+1.1
2,483,712	+		Synpcc7942_2410	0.70	-0.3
2,483,720	-		Synpcc7942_2410	0.70	-0.3
2,483,720	-		Synpcc7942_2410	0.70	+1.5
2,483,733	+		Synpcc7942_2410	0.72	-0.3
2,483,770	+		Synpcc7942_2410	0.75	-1.7
2,483,770	+		Synpcc7942_2410	0.75	+2.0
2,483,770	+		Synpcc7942_2410	0.75	+1.0
2,483,773	+		Synpcc7942_2410	0.76	+0.0
2,483,775	+		Synpcc7942_2410	0.76	-2.7
2,483,780	+		Synpcc7942_2410	0.76	+1.2
2,483,780	+		Synpcc7942_2410	0.76	+0.7
2,483,788	-		Synpcc7942_2410	0.77	-0.1
2,483,793	+		Synpcc7942_2410	0.77	-0.3
2,483,801	-		Synpcc7942_2410	0.78	+0.3
2,483,801	-		Synpcc7942_2410	0.78	+0.2
2,483,804	+		Synpcc7942_2410	0.79	-0.3
2,483,837	+		Synpcc7942_2410	0.82	-0.9
2,483,857	-		Synpcc7942_2410	0.84	+1.5
2,483,873	+		Synpcc7942_2410	0.85	+0.1
2,483,881	-		Synpcc7942_2410	0.86	+0.6
2,483,881	-		Synpcc7942_2410	0.86	+1.7
2,483,883	+		Synpcc7942_2410	0.86	+1.7
2,483,891	-		Synpcc7942_2410	0.87	-1.3
2,483,909	+		Synpcc7942_2410	0.89	-1.3
2,483,917	-		Synpcc7942_2410	0.89	+2.7
2,483,917	-		Synpcc7942_2410	0.89	+2.0
2,483,917	-		Synpcc7942_2410	0.89	-0.3
2,483,977	+				-1.3
2,484,002	+				+2.0
2,484,010	-				-1.3
2,484,010	-				-0.3
2,484,011	-				+1.3
2,484,016	-				+0.7
2,484,029	-				+0.3
2,484,084	+				+2.3
2,484,091	+				+1.7
2,484,092	+				+2.0
2,484,137	+				+0.7
2,484,137	+				+2.2
2,484,138	-				-0.3
2,484,151	+				+2.2
2,484,408	-				-1.3
2,484,410	+				-0.3
2,484,725	+	phb	Synpcc7942_2412	0.35	+0.7
2,484,770	+	phb	Synpcc7942_2412	0.41	+3.0