Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2021
Experiment: Nalidixic 0.0078125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.0078125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,090,143 | - | Synpcc7942_2021 | 0.19 | -1.3 | |
2,090,347 | + | Synpcc7942_2021 | 0.88 | +3.0 | |
2,090,361 | + | +2.8 | |||
2,090,361 | + | +2.3 | |||
2,090,375 | + | -0.9 | |||
2,090,397 | + | -1.3 | |||
2,090,405 | - | -0.1 | |||
2,090,424 | + | -0.7 | |||
2,090,432 | - | -0.3 | |||
2,090,448 | + | -3.5 | |||
2,090,468 | - | -0.1 | |||
2,090,478 | + | +2.0 | |||
2,090,535 | + | nusA | Synpcc7942_2022 | 0.12 | +0.5 |
2,090,543 | - | nusA | Synpcc7942_2022 | 0.12 | -1.3 |
Or see this region's nucleotide sequence