Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1697

Experiment: Nalidixic 0.0078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.0078125 mg/ml
1,763,646	+				+1.5
1,763,646	+				+2.8
1,763,646	+				+1.3
1,763,646	+				+0.6
1,763,646	+				-1.4
1,763,653	+				+2.1
1,763,654	-				+1.1
1,763,660	+				-1.9
1,763,660	+				-0.4
1,763,660	+				-1.9
1,763,660	+				+1.3
1,763,668	-				-0.7
1,763,682	+				+1.6
1,763,682	+				+1.2
1,763,690	-				-0.0
1,763,699	+				+0.2
1,763,752	-				+4.4
1,763,757	+				-3.2
1,763,771	-				-0.6
1,763,776	-				-0.4
1,763,776	-				+3.4
1,763,780	+				-3.4
1,763,788	-		Synpcc7942_1696	0.10	-1.4
1,763,788	-		Synpcc7942_1696	0.10	+2.1
1,763,828	+		Synpcc7942_1696	0.16	+1.6
1,763,828	+		Synpcc7942_1696	0.16	+1.8
1,763,828	+		Synpcc7942_1696	0.16	-1.9
1,763,829	-		Synpcc7942_1696	0.16	+1.9
1,763,835	-		Synpcc7942_1696	0.17	+1.8
1,763,836	-		Synpcc7942_1696	0.17	+2.7
1,763,836	-		Synpcc7942_1696	0.17	+0.2
1,763,836	-		Synpcc7942_1696	0.17	-0.4
1,763,836	-		Synpcc7942_1696	0.17	+0.6
1,763,843	+		Synpcc7942_1696	0.18	-0.4
1,763,859	-		Synpcc7942_1696	0.20	+2.0
1,763,872	-		Synpcc7942_1696	0.22	+0.9
1,763,872	-		Synpcc7942_1696	0.22	-1.4
1,763,913	-		Synpcc7942_1696	0.27	-0.7
1,763,964	-		Synpcc7942_1696	0.34	+1.8
1,763,972	-		Synpcc7942_1696	0.35	+3.7
1,763,972	-		Synpcc7942_1696	0.35	+2.5
1,763,975	+		Synpcc7942_1696	0.35	-1.4
1,763,975	+		Synpcc7942_1696	0.35	-2.9
1,763,980	+		Synpcc7942_1696	0.36	+1.5
1,763,983	-		Synpcc7942_1696	0.37	-1.6
1,763,983	-		Synpcc7942_1696	0.37	-0.4
1,763,985	+		Synpcc7942_1696	0.37	-0.4
1,763,993	+		Synpcc7942_1696	0.38	+1.9
1,764,001	+		Synpcc7942_1696	0.39	-1.4
1,764,012	+		Synpcc7942_1696	0.40	+0.4
1,764,018	+		Synpcc7942_1696	0.41	+3.5
1,764,026	+		Synpcc7942_1696	0.42	+2.7
1,764,116	+				+3.1
1,764,116	+		Synpcc7942_1696	0.55	-1.4
1,764,136	+		Synpcc7942_1696	0.57	-1.4
1,764,141	-		Synpcc7942_1696	0.58	+1.6
1,764,151	+		Synpcc7942_1696	0.59	+0.1
1,764,154	-		Synpcc7942_1696	0.60	+3.5
1,764,159	+		Synpcc7942_1696	0.60	-0.4
1,764,166	+		Synpcc7942_1696	0.61	+0.2
1,764,167	-		Synpcc7942_1696	0.61	+2.5
1,764,195	+		Synpcc7942_1696	0.65	+1.0
1,764,200	+		Synpcc7942_1696	0.66	-0.1
1,764,208	-		Synpcc7942_1696	0.67	+1.0
1,764,212	+		Synpcc7942_1696	0.67	+1.5
1,764,219	-		Synpcc7942_1696	0.68	+4.3
1,764,302	+		Synpcc7942_1696	0.80	+0.9
1,764,310	-		Synpcc7942_1696	0.81	+0.2
1,764,310	-		Synpcc7942_1696	0.81	-1.9
1,764,312	+		Synpcc7942_1696	0.81	+2.5
1,764,314	+		Synpcc7942_1696	0.81	+3.6
1,764,320	-		Synpcc7942_1696	0.82	+2.2
1,764,349	-		Synpcc7942_1696	0.86	+1.6
1,764,349	-		Synpcc7942_1696	0.86	+0.6
1,764,366	-		Synpcc7942_1696	0.88	+0.8
1,764,366	-		Synpcc7942_1696	0.88	-2.9
1,764,371	+		Synpcc7942_1696	0.89	+1.4
1,764,400	+				-1.4
1,764,417	+				-0.8
1,764,417	+				+2.5
1,764,449	+				+1.5
1,764,457	-				+2.3
1,764,473	-				+2.6
1,764,497	-				-2.4
1,764,511	-				-0.8
1,764,525	-				+3.1
1,764,536	+				-1.4
1,764,544	-				-0.9
1,764,577	+				-1.4
1,764,609	+				-0.9
1,764,623	-				+0.5
1,764,642	-		Synpcc7942_1697	0.11	+2.0
1,764,657	-		Synpcc7942_1697	0.16	+2.0
1,764,661	+		Synpcc7942_1697	0.18	-1.4
1,764,667	-		Synpcc7942_1697	0.20	+1.6
1,764,667	-		Synpcc7942_1697	0.20	-1.4
1,764,705	+		Synpcc7942_1697	0.33	+1.3
1,764,719	-		Synpcc7942_1697	0.38	+4.6
1,764,729	+		Synpcc7942_1697	0.42	-3.2
1,764,729	+		Synpcc7942_1697	0.42	+0.9
1,764,737	-		Synpcc7942_1697	0.45	+0.9
1,764,737	-		Synpcc7942_1697	0.45	-1.7
1,764,737	-		Synpcc7942_1697	0.45	+0.3
1,764,737	-		Synpcc7942_1697	0.45	-0.4
1,764,737	-		Synpcc7942_1697	0.45	-3.2
1,764,763	+		Synpcc7942_1697	0.54	+2.8
1,764,773	+		Synpcc7942_1697	0.57	+1.8
1,764,781	-		Synpcc7942_1697	0.60	-0.7
1,764,781	-		Synpcc7942_1697	0.60	-2.4
1,764,781	-		Synpcc7942_1697	0.60	-0.4
1,764,797	-		Synpcc7942_1697	0.66	-0.0
1,764,821	+		Synpcc7942_1697	0.74	+2.0
1,764,821	+		Synpcc7942_1697	0.74	-0.5
1,764,829	+		Synpcc7942_1697	0.77	-0.4
1,764,829	+		Synpcc7942_1697	0.77	+3.6
1,764,829	+		Synpcc7942_1697	0.77	+2.8
1,764,837	-		Synpcc7942_1697	0.80	-0.4
1,764,837	-		Synpcc7942_1697	0.80	+1.0
1,764,867	-				+2.7
1,764,872	-				+2.0
1,764,890	-				-1.4
1,765,159	+		Synpcc7942_1698	0.21	+1.2
1,765,197	+		Synpcc7942_1698	0.32	+3.0
1,765,205	-		Synpcc7942_1698	0.35	+0.6
1,765,258	-		Synpcc7942_1698	0.50	+3.9
1,765,275	-		Synpcc7942_1698	0.55	+2.2
1,765,297	+		Synpcc7942_1698	0.61	+1.5
1,765,305	-		Synpcc7942_1698	0.64	-2.7
1,765,305	-		Synpcc7942_1698	0.64	+3.6
1,765,324	-		Synpcc7942_1698	0.69	+2.5
1,765,332	-		Synpcc7942_1698	0.72	+1.1
1,765,344	+		Synpcc7942_1698	0.75	+0.6
1,765,344	-		Synpcc7942_1698	0.75	+1.8
1,765,354	-		Synpcc7942_1698	0.78	+1.1
1,765,364	-		Synpcc7942_1698	0.81	+3.2
1,765,374	-		Synpcc7942_1698	0.84	+1.6
1,765,386	-				-1.9
1,765,386	-		Synpcc7942_1698	0.87	+1.2
1,765,398	-				+3.1
1,765,421	+				+2.3
1,765,424	-				-2.7
1,765,439	+				+1.0
1,765,439	-				-2.4
1,765,439	-				-1.4
1,765,491	-				-1.4
1,765,544	+				-0.4
1,765,556	-				+1.5
1,765,592	+				-0.9
1,765,605	-		Synpcc7942_1699	0.10	+2.5
1,765,605	-		Synpcc7942_1699	0.10	+2.1
1,765,610	-		Synpcc7942_1699	0.11	-0.1
1,765,620	-		Synpcc7942_1699	0.11	+0.2
1,765,628	-		Synpcc7942_1699	0.12	-0.4
1,765,651	-		Synpcc7942_1699	0.13	+0.6
1,765,666	+		Synpcc7942_1699	0.15	+0.4
1,765,671	+		Synpcc7942_1699	0.15	+2.1
1,765,704	+		Synpcc7942_1699	0.17	+1.2
1,765,731	-		Synpcc7942_1699	0.19	-1.9
1,765,731	-		Synpcc7942_1699	0.19	+2.6
1,765,733	-		Synpcc7942_1699	0.19	-0.3
1,765,735	-		Synpcc7942_1699	0.20	+2.1
1,765,738	-				-0.3
1,765,745	-		Synpcc7942_1699	0.20	+1.9
1,765,773	+		Synpcc7942_1699	0.22	-1.3
1,765,781	-		Synpcc7942_1699	0.23	+3.5
1,765,781	-		Synpcc7942_1699	0.23	-0.1
1,765,785	+		Synpcc7942_1699	0.23	-1.3
1,765,785	+		Synpcc7942_1699	0.23	+1.2
1,765,793	-		Synpcc7942_1699	0.24	+2.0
1,765,793	-		Synpcc7942_1699	0.24	+0.3
1,765,807	+		Synpcc7942_1699	0.25	+1.2
1,765,807	+		Synpcc7942_1699	0.25	+2.7
1,765,812	+		Synpcc7942_1699	0.25	-0.9
1,765,848	+		Synpcc7942_1699	0.28	+3.4
1,765,853	+		Synpcc7942_1699	0.28	+3.8
1,765,884	-		Synpcc7942_1699	0.30	+0.4
1,765,886	+		Synpcc7942_1699	0.30	+2.8