Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1568

Experiment: Nalidixic 0.0078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.0078125 mg/ml
1,625,428	+				-0.4
1,625,429	-				+4.0
1,625,433	+				-0.4
1,625,434	-				+2.2
1,625,492	-				-1.9
1,625,550	+				-1.4
1,625,553	+				-0.4
1,625,556	-				-2.7
1,625,563	-				-0.9
1,625,602	-				-1.4
1,625,630	+				-1.9
1,625,638	-				+1.6
1,625,651	+				-1.4
1,625,656	+				+3.7
1,625,656	+				-0.4
1,625,664	-				+0.4
1,625,672	-				-2.7
1,625,680	+				-0.4
1,625,771	-		Synpcc7942_1567	0.22	-1.4
1,625,795	-		Synpcc7942_1567	0.29	+0.8
1,625,821	+		Synpcc7942_1567	0.37	-1.9
1,625,825	+		Synpcc7942_1567	0.39	-0.2
1,625,842	+		Synpcc7942_1567	0.44	+3.5
1,625,850	-		Synpcc7942_1567	0.47	+0.9
1,625,850	-		Synpcc7942_1567	0.47	+1.5
1,625,968	-		Synpcc7942_1567	0.84	-0.9
1,626,019	-				+1.8
1,626,049	+				-0.4
1,626,091	-				-1.4
1,626,091	-				+1.0
1,626,092	+				+2.8
1,626,092	+				+3.4
1,626,092	+				-0.4
1,626,100	-				-2.4
1,626,100	-				+0.2
1,626,100	-				+1.9
1,626,100	-				+1.8
1,626,135	-				+4.3
1,626,135	-				+3.1
1,626,152	+				-1.4
1,626,160	-				+0.8
1,626,160	-				-0.4
1,626,179	-				+0.6
1,626,204	+				-1.4
1,626,227	-				+3.0
1,626,251	+				+1.5
1,626,251	+				+0.9
1,626,259	-				+1.8
1,626,264	-				-1.4
1,626,276	+				+2.1
1,626,305	+				-1.9
1,626,318	-				-2.8
1,626,323	+				+3.1
1,626,366	-				+1.6
1,626,391	+		Synpcc7942_1568	0.14	-1.4
1,626,391	+		Synpcc7942_1568	0.14	+1.6
1,626,394	-		Synpcc7942_1568	0.15	+1.1
1,626,399	-		Synpcc7942_1568	0.17	+2.9
1,626,399	-		Synpcc7942_1568	0.17	+0.6
1,626,403	-		Synpcc7942_1568	0.19	-0.4
1,626,518	+		Synpcc7942_1568	0.67	+2.4
1,626,518	+		Synpcc7942_1568	0.67	+0.2
1,626,518	+		Synpcc7942_1568	0.67	-1.4
1,626,518	+		Synpcc7942_1568	0.67	-1.9
1,626,518	+		Synpcc7942_1568	0.67	-1.9
1,626,518	+		Synpcc7942_1568	0.67	-1.4
1,626,518	+		Synpcc7942_1568	0.67	-0.0
1,626,518	+		Synpcc7942_1568	0.67	+1.8
1,626,518	+		Synpcc7942_1568	0.67	+2.1
1,626,518	+		Synpcc7942_1568	0.67	+3.0
1,626,526	-		Synpcc7942_1568	0.70	+4.8
1,626,526	-		Synpcc7942_1568	0.70	+2.6
1,626,526	-		Synpcc7942_1568	0.70	-0.4
1,626,526	-		Synpcc7942_1568	0.70	+1.0
1,626,526	-		Synpcc7942_1568	0.70	+1.4
1,626,526	-		Synpcc7942_1568	0.70	-1.9
1,626,526	-		Synpcc7942_1568	0.70	+0.9
1,626,526	-		Synpcc7942_1568	0.70	-1.9
1,626,526	-		Synpcc7942_1568	0.70	-1.4
1,626,526	-		Synpcc7942_1568	0.70	-0.4
1,626,526	-		Synpcc7942_1568	0.70	+2.7
1,626,526	-		Synpcc7942_1568	0.70	+4.7
1,626,526	-		Synpcc7942_1568	0.70	+4.2
1,626,607	+				+1.2
1,626,649	+				+1.7
1,626,651	+				+0.6
1,626,657	+				+2.2
1,626,659	-				+0.6
1,626,681	-				+3.3
1,626,708	+		Synpcc7942_1569	0.12	-0.4
1,626,716	-		Synpcc7942_1569	0.13	+2.0
1,626,764	-		Synpcc7942_1569	0.24	+1.8
1,626,774	+		Synpcc7942_1569	0.26	+2.2
1,626,774	+		Synpcc7942_1569	0.26	+4.0
1,626,782	-		Synpcc7942_1569	0.28	-0.4
1,626,782	-		Synpcc7942_1569	0.28	-1.4
1,626,782	-		Synpcc7942_1569	0.28	-1.9
1,626,782	-		Synpcc7942_1569	0.28	-0.4
1,626,784	-		Synpcc7942_1569	0.28	+0.1
1,626,806	+		Synpcc7942_1569	0.33	-0.4
1,626,809	+		Synpcc7942_1569	0.34	-1.9
1,626,913	-		Synpcc7942_1569	0.56	+2.4
1,626,928	+		Synpcc7942_1569	0.59	+0.9
1,626,946	+		Synpcc7942_1569	0.63	+2.1
1,626,953	+		Synpcc7942_1569	0.65	+1.4
1,626,999	+		Synpcc7942_1569	0.75	+0.2
1,627,051	+		Synpcc7942_1569	0.86	+2.7
1,627,054	+		Synpcc7942_1569	0.87	-0.4
1,627,056	+		Synpcc7942_1569	0.87	+3.5
1,627,056	+		Synpcc7942_1569	0.87	+1.6
1,627,056	+		Synpcc7942_1569	0.87	+5.0
1,627,064	-		Synpcc7942_1569	0.89	-2.7
1,627,166	-				+2.8
1,627,176	-				-1.9
1,627,179	+				+2.1
1,627,179	+				+2.1
1,627,182	+				+1.9
1,627,214	+				-1.4
1,627,229	+				-0.8
1,627,229	+				-0.4
1,627,235	+				-1.1
1,627,235	+				-1.9
1,627,237	-				-1.9
1,627,245	-				+1.4
1,627,248	+				-0.4
1,627,255	-				-0.4
1,627,268	-				-1.9
1,627,268	-				-1.4
1,627,268	-				-0.4
1,627,279	-				-3.4
1,627,313	-				-1.4
1,627,315	+				-0.9
1,627,315	+				-2.4
1,627,320	+				-1.4
1,627,323	-				-0.4
1,627,323	-				+1.4
1,627,323	-				+0.4
1,627,323	-				-2.9
1,627,323	-				-2.4
1,627,330	-				-2.4
1,627,359	-				-1.1
1,627,385	-				-1.1
1,627,410	+				-1.7
1,627,432	+	pacS	Synpcc7942_1570	0.10	-0.4
1,627,548	+	pacS	Synpcc7942_1570	0.15	-2.9
1,627,548	+	pacS	Synpcc7942_1570	0.15	-1.9
1,627,579	+	pacS	Synpcc7942_1570	0.17	-0.4
1,627,587	-	pacS	Synpcc7942_1570	0.17	-0.4