Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0344

Experiment: Nalidixic 0.0078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.0078125 mg/ml
336,425	-		Synpcc7942_0342	0.27	-1.8
336,452	+		Synpcc7942_0342	0.39	-3.0
336,468	+		Synpcc7942_0342	0.46	+2.0
336,498	+		Synpcc7942_0342	0.59	+0.8
336,504	+		Synpcc7942_0342	0.62	-0.2
336,506	-		Synpcc7942_0342	0.63	+2.8
336,512	-		Synpcc7942_0342	0.65	-2.6
336,544	-		Synpcc7942_0342	0.79	+2.1
336,544	-		Synpcc7942_0342	0.79	-0.2
336,563	-		Synpcc7942_0342	0.88	-1.2
336,590	+				+2.6
336,640	+				+0.4
336,769	-	psb27	Synpcc7942_0343	0.29	+0.9
336,774	+	psb27	Synpcc7942_0343	0.30	-1.2
336,774	+	psb27	Synpcc7942_0343	0.30	-1.2
336,814	-	psb27	Synpcc7942_0343	0.40	-1.2
336,838	+	psb27	Synpcc7942_0343	0.46	-1.2
336,933	+	psb27	Synpcc7942_0343	0.69	-2.2
337,050	+				+3.2
337,050	+				+2.6
337,050	+				-0.9
337,058	-				-1.2
337,058	-				+3.9
337,058	-				+0.9
337,058	-				+1.5
337,058	-				-2.2
337,101	+				-0.4
337,107	+				+0.3
337,200	+				-1.2
337,200	+				-2.5
337,200	+				+0.8
337,201	+				+0.9
337,201	+				+1.9
337,201	+				+1.7
337,201	+				+1.8
337,201	+				+1.4
337,201	+				+1.1
337,201	+				+1.6
337,201	+				+1.6
337,209	-				+3.3
337,209	-				+4.6
337,209	-				+2.8
337,209	-				-1.2
337,209	-				-1.2
337,222	-				-0.8
337,224	+				-1.8
337,236	+				-1.8
337,245	-				+1.9
337,249	+				-0.4
337,257	+				+3.5
337,257	+				+2.2
337,327	+				-0.2
337,364	+				+3.1
337,405	+				-0.2
337,405	+				-2.8
337,412	+				-0.2
337,412	+				+0.6
337,413	-				-1.8
337,420	-				+0.8
337,431	+				-1.2
337,442	+				-0.2
337,486	+				+0.8
337,489	+				-1.2
337,540	+		Synpcc7942_0344	0.13	-1.8
337,563	-		Synpcc7942_0344	0.15	+1.1
337,593	-		Synpcc7942_0344	0.18	-0.2
337,707	+		Synpcc7942_0344	0.29	-1.2
337,719	-		Synpcc7942_0344	0.30	-1.2
337,814	+		Synpcc7942_0344	0.39	-0.2
337,821	-		Synpcc7942_0344	0.40	-2.2
337,821	-		Synpcc7942_0344	0.40	-2.4
337,846	+		Synpcc7942_0344	0.42	-1.0
337,854	-		Synpcc7942_0344	0.43	+1.1
337,854	-		Synpcc7942_0344	0.43	-1.2
337,870	+		Synpcc7942_0344	0.44	-1.2
337,870	+		Synpcc7942_0344	0.44	-0.7
337,880	+				+2.6
337,951	-		Synpcc7942_0344	0.52	-0.2
337,958	+		Synpcc7942_0344	0.53	-0.2
337,966	-		Synpcc7942_0344	0.53	-0.2
337,980	+		Synpcc7942_0344	0.55	-1.2
338,009	+		Synpcc7942_0344	0.58	-2.6
338,009	+		Synpcc7942_0344	0.58	-1.5
338,017	-		Synpcc7942_0344	0.58	-1.2
338,042	-		Synpcc7942_0344	0.61	-2.2
338,046	-		Synpcc7942_0344	0.61	+3.2
338,121	-		Synpcc7942_0344	0.68	-0.2
338,220	+		Synpcc7942_0344	0.78	+0.3
338,281	+		Synpcc7942_0344	0.84	-1.0
338,320	-		Synpcc7942_0344	0.87	-3.6
338,320	-		Synpcc7942_0344	0.87	-0.2
338,331	-		Synpcc7942_0344	0.88	-1.2
338,379	-				-1.8
338,402	+				+1.3
338,405	-				+0.9
338,421	-				-1.8
338,435	-				-0.2
338,435	-				-0.2
338,437	-				+0.8
338,446	+				-0.2
338,454	-				-1.2
338,454	-				-0.2
338,463	-				+1.8
338,464	-				-0.6
338,480	+				-1.8
338,485	-				+4.3
338,488	-				+2.4
338,492	+				+1.6
338,492	+				+3.7
338,515	-				+1.0
338,534	+				+0.6
338,566	-				+3.3
339,336	+				+1.3
339,344	+				+0.7
339,371	-				+1.3