Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0122

Experiment: Nalidixic 0.0078125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.0078125 mg/ml
121,254	+				-0.3
121,399	-				+0.7
121,410	+				-1.9
121,418	-				+5.1
121,496	+				+3.5
121,837	-				+2.0
121,837	-				-2.3
121,841	+				+2.3
121,841	+				-1.9
121,849	-				+2.9
121,910	+				+1.3
122,136	-		Synpcc7942_0122	0.19	+3.1
122,218	-		Synpcc7942_0122	0.25	+1.8
122,249	-		Synpcc7942_0122	0.26	+2.3
122,272	-		Synpcc7942_0122	0.28	+3.0
122,279	+		Synpcc7942_0122	0.28	+2.2
122,311	+		Synpcc7942_0122	0.30	+2.5
122,311	+		Synpcc7942_0122	0.30	+0.3
122,317	-		Synpcc7942_0122	0.31	-1.3
122,319	-		Synpcc7942_0122	0.31	+1.2
122,541	+		Synpcc7942_0122	0.45	+2.2
122,952	+		Synpcc7942_0122	0.71	-1.3
123,037	+		Synpcc7942_0122	0.76	+2.5
123,045	-		Synpcc7942_0122	0.77	+3.2
123,047	-		Synpcc7942_0122	0.77	+0.6
123,058	+		Synpcc7942_0122	0.78	-0.7
123,164	+		Synpcc7942_0122	0.84	+4.2
123,174	+		Synpcc7942_0122	0.85	+0.4
123,187	+		Synpcc7942_0122	0.86	-1.9
123,195	-		Synpcc7942_0122	0.86	-0.3
123,195	-		Synpcc7942_0122	0.86	-0.3
123,195	-		Synpcc7942_0122	0.86	-0.3
123,195	-		Synpcc7942_0122	0.86	+1.3
123,337	+				+2.8
123,378	-				-1.9
123,471	-				+1.1
123,724	+				-1.1
123,748	-				+2.5
123,791	-				+1.4
123,798	-				+0.7
123,857	-		Synpcc7942_0123	0.54	+2.3
123,886	+		Synpcc7942_0123	0.87	+0.8
123,886	+		Synpcc7942_0123	0.87	+0.7
123,886	+		Synpcc7942_0123	0.87	-3.3
123,894	-				-0.3
123,924	+				-0.3
123,932	-				-0.9
123,942	-				+3.8
123,962	+	tRNA-Cys	Synpcc7942_R0027	0.30	-0.3
123,977	+	tRNA-Cys	Synpcc7942_R0027	0.50	+2.5
124,024	-				+0.0
124,030	-				-1.9
124,067	+				-2.3
124,075	-				+1.1
124,075	-				-1.3
124,099	+				+2.1
124,100	+				+2.7
124,115	+				+0.7
124,123	-				-0.3
124,127	+				+0.6
124,142	+		Synpcc7942_0124	0.12	-1.3
124,150	+		Synpcc7942_0124	0.13	+1.5
124,160	+		Synpcc7942_0124	0.15	+2.7
124,168	-				+1.3
124,168	-		Synpcc7942_0124	0.16	-0.3
124,168	-		Synpcc7942_0124	0.16	+2.3
124,168	-		Synpcc7942_0124	0.16	-0.3
124,168	-		Synpcc7942_0124	0.16	+2.5
124,183	+		Synpcc7942_0124	0.19	+2.2
124,199	+		Synpcc7942_0124	0.21	+3.2
124,207	-		Synpcc7942_0124	0.23	-3.1
124,207	-		Synpcc7942_0124	0.23	-0.5
124,207	-		Synpcc7942_0124	0.23	-1.3
124,210	+		Synpcc7942_0124	0.23	-0.3
124,210	+		Synpcc7942_0124	0.23	+2.6
124,230	+		Synpcc7942_0124	0.27	+3.4
124,230	+		Synpcc7942_0124	0.27	-0.3
124,230	+		Synpcc7942_0124	0.27	-1.9
124,238	-		Synpcc7942_0124	0.28	+2.1
124,238	-		Synpcc7942_0124	0.28	+0.3
124,286	+		Synpcc7942_0124	0.36	+2.0
124,286	+		Synpcc7942_0124	0.36	+0.8
124,286	+		Synpcc7942_0124	0.36	-0.3
124,302	-		Synpcc7942_0124	0.39	+1.3
124,322	+		Synpcc7942_0124	0.42	-1.9
124,334	+		Synpcc7942_0124	0.44	+0.7
124,334	+		Synpcc7942_0124	0.44	-2.1
124,334	+		Synpcc7942_0124	0.44	-1.3
124,342	-		Synpcc7942_0124	0.45	+1.0
124,344	+		Synpcc7942_0124	0.46	+1.4
124,352	-		Synpcc7942_0124	0.47	+4.0
124,352	-		Synpcc7942_0124	0.47	+2.5
124,352	-		Synpcc7942_0124	0.47	-0.3
124,365	+		Synpcc7942_0124	0.49	+2.6
124,405	+		Synpcc7942_0124	0.56	-1.9
124,405	+				-0.3
124,407	+		Synpcc7942_0124	0.56	-2.6
124,407	+		Synpcc7942_0124	0.56	+2.9