Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_RNA46

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,705,551	+		Psyr_3090	0.68	+1.3
3,705,555	+		Psyr_3090	0.68	+2.3
3,705,556	-		Psyr_3090	0.68	+2.6
3,705,605	+		Psyr_3090	0.76	-1.3
3,705,621	-		Psyr_3090	0.78	+3.5
3,705,737	+				+3.6
3,705,820	+				-0.2
3,705,843	-				+0.8
3,705,858	-				+1.3
3,705,933	-				-0.5
3,705,958	-				-0.2
3,706,035	+				+0.8
3,706,055	-				-0.2
3,706,055	-				+3.5
3,706,216	-				-3.8
3,706,277	+				-2.2
3,706,278	-				-0.2
3,706,278	-				-0.5
3,706,279	+				-1.6
3,706,279	+				-0.2
3,706,344	-				-0.2
3,706,344	-				-2.6
3,706,352	+				-0.2
3,706,433	+				+0.8
3,706,434	-				-1.8
3,706,434	-				-2.1
3,706,434	-				+1.8
3,706,666	+				-0.2
3,706,666	+				-1.9
3,706,666	+				-2.9
3,706,666	+				+2.9
3,706,667	-				-1.3
3,707,109	+		Psyr_3091	0.56	+2.8
3,707,109	+		Psyr_3091	0.56	-1.4
3,707,109	+		Psyr_3091	0.56	+1.0
3,707,109	+		Psyr_3091	0.56	+2.6
3,707,109	+		Psyr_3091	0.56	+2.1
3,707,109	+		Psyr_3091	0.56	+4.1
3,707,110	-		Psyr_3091	0.56	-5.2
3,707,110	-		Psyr_3091	0.56	-0.8
3,707,110	-		Psyr_3091	0.56	+2.9
3,707,110	-		Psyr_3091	0.56	+0.6
3,707,110	-		Psyr_3091	0.56	+1.8
3,707,110	-		Psyr_3091	0.56	-0.1
3,707,110	-				+2.1
3,707,110	-		Psyr_3091	0.56	-1.8
3,707,325	-		Psyr_3091	0.88	-3.1
3,707,427	-				+2.6