Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5132

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
6,086,041	+				-2.2
6,086,042	-				-2.9
6,086,046	+				+0.1
6,086,089	+				-3.2
6,086,090	-				+4.2
6,086,171	-		Psyr_5131	0.16	+2.3
6,086,217	+		Psyr_5131	0.23	-1.4
6,086,217	+		Psyr_5131	0.23	-2.2
6,086,217	+		Psyr_5131	0.23	-0.3
6,086,217	+		Psyr_5131	0.23	+2.6
6,086,217	+		Psyr_5131	0.23	+3.3
6,086,218	-		Psyr_5131	0.23	-0.2
6,086,346	+		Psyr_5131	0.43	+2.4
6,086,579	+		Psyr_5131	0.79	+0.0
6,086,579	+		Psyr_5131	0.79	+0.7
6,086,579	+		Psyr_5131	0.79	-1.8
6,086,580	-		Psyr_5131	0.79	-1.2
6,086,580	-		Psyr_5131	0.79	-1.1
6,086,613	-		Psyr_5131	0.84	-1.0
6,086,677	+				-2.2
6,086,706	+				+0.4
6,086,706	+				+0.0
6,086,706	+				-2.1
6,086,707	-				-1.7
6,086,836	-				+1.9
6,087,086	-		Psyr_5132	0.20	-3.7
6,087,086	-		Psyr_5132	0.20	-3.7
6,087,342	-		Psyr_5132	0.33	-3.0
6,087,380	-		Psyr_5132	0.35	+0.3
6,087,380	-		Psyr_5132	0.35	-3.2
6,087,380	-		Psyr_5132	0.35	+1.9
6,087,542	-		Psyr_5132	0.44	-1.7
6,087,542	-		Psyr_5132	0.44	-3.4
6,087,792	-		Psyr_5132	0.57	+1.3
6,087,812	-		Psyr_5132	0.58	-1.4
6,088,643	-				-1.0
6,088,654	-				+0.7
6,088,654	-				+0.7
6,088,654	-				-1.8
6,088,654	-				-1.7
6,088,654	-				-0.5
6,088,654	-				-0.4
6,088,799	+				-0.0
6,088,807	+				+1.3
6,088,807	+				+1.9
6,088,817	+				+0.4
6,088,831	-				+1.3
6,088,904	-				+0.9
6,088,927	+				-1.9
6,088,928	-				-3.4
6,088,962	+				-1.0
6,088,987	-				-2.9
6,088,987	-				-1.5
6,089,083	-				-0.9
6,089,102	+				+3.3
6,089,102	+				+3.1
6,089,102	+				+0.1
6,089,102	+				+2.9
6,089,102	+				+0.7
6,089,102	+				+3.5
6,089,102	+				-1.5
6,089,103	-				-1.0
6,089,103	-				-2.4
6,089,103	-				-4.2
6,089,103	-				-0.6
6,089,103	-				-3.4
6,089,103	-				+2.3
6,089,103	-				+2.3
6,089,103	-				-0.5
6,089,103	-				-2.8
6,089,182	+				-1.0
6,089,182	+				+0.2
6,089,182	+				+1.0
6,089,182	+				-1.9
6,089,183	-				+0.5
6,089,183	-				-0.5