Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4115

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
4,905,219	-		Psyr_4113	0.79	-0.2
4,905,239	+		Psyr_4113	0.80	+0.1
4,905,284	+		Psyr_4113	0.83	-0.1
4,905,284	+		Psyr_4113	0.83	+0.0
4,905,284	+		Psyr_4113	0.83	+4.5
4,905,284	+		Psyr_4113	0.83	-1.6
4,905,284	+		Psyr_4113	0.83	+0.3
4,905,284	+		Psyr_4113	0.83	+0.1
4,905,284	+		Psyr_4113	0.83	+4.4
4,905,284	+		Psyr_4113	0.83	-0.9
4,905,284	+		Psyr_4113	0.83	+0.0
4,905,284	+		Psyr_4113	0.83	-0.1
4,905,284	+		Psyr_4113	0.83	-0.1
4,905,284	+		Psyr_4113	0.83	+1.1
4,905,284	+		Psyr_4113	0.83	-0.9
4,905,284	+		Psyr_4113	0.83	+4.4
4,905,285	-		Psyr_4113	0.83	-2.6
4,905,285	-		Psyr_4113	0.83	-0.8
4,905,285	-		Psyr_4113	0.83	-1.9
4,905,285	-		Psyr_4113	0.83	-1.1
4,905,285	-		Psyr_4113	0.83	-0.2
4,905,285	-		Psyr_4113	0.83	+2.5
4,905,285	-		Psyr_4113	0.83	-0.4
4,905,285	-		Psyr_4113	0.83	+4.1
4,905,285	-		Psyr_4113	0.83	-0.7
4,905,285	-		Psyr_4113	0.83	-1.6
4,905,285	-		Psyr_4113	0.83	+3.5
4,905,285	-		Psyr_4113	0.83	+1.7
4,905,404	+		Psyr_4113	0.90	+3.5
4,905,405	-		Psyr_4113	0.90	+0.9
4,905,405	-		Psyr_4113	0.90	-0.5
4,905,425	+				+0.0
4,905,426	-				+3.8
4,905,692	+		Psyr_4114	0.27	+3.6
4,905,716	+		Psyr_4114	0.33	+0.1
4,905,716	+		Psyr_4114	0.33	+2.1
4,905,716	+		Psyr_4114	0.33	-0.9
4,905,716	+		Psyr_4114	0.33	-1.2
4,905,716	+		Psyr_4114	0.33	+4.7
4,905,716	+		Psyr_4114	0.33	-1.4
4,905,716	+		Psyr_4114	0.33	-2.7
4,905,716	+		Psyr_4114	0.33	+4.7
4,905,717	-		Psyr_4114	0.34	-0.6
4,905,717	-		Psyr_4114	0.34	+0.1
4,905,735	+		Psyr_4114	0.38	+2.9
4,905,740	+		Psyr_4114	0.40	-1.1
4,905,740	+		Psyr_4114	0.40	-1.2
4,905,740	+		Psyr_4114	0.40	+3.5
4,905,740	+		Psyr_4114	0.40	+3.3
4,905,740	+		Psyr_4114	0.40	+4.1
4,905,743	+		Psyr_4114	0.41	+1.7
4,905,743	+		Psyr_4114	0.41	+2.9
4,906,000	+				+2.9
4,906,026	+				+3.6
4,906,026	+				+3.1
4,906,108	+				-1.7
4,906,108	+				-0.7
4,906,108	+				-1.7
4,906,108	+				+3.5
4,906,109	-				+0.7
4,906,109	-				-2.2
4,906,112	+				-1.9
4,906,112	+				-2.3
4,906,112	+				+0.1
4,906,112	+				-2.5
4,906,413	+		Psyr_4115	0.48	+0.1
4,906,414	-		Psyr_4115	0.49	+1.1
4,906,503	-		Psyr_4115	0.64	-3.0
4,906,505	+		Psyr_4115	0.64	+1.7
4,906,506	-		Psyr_4115	0.64	+1.7
4,906,642	+		Psyr_4115	0.87	-2.7
4,906,724	-				+1.5
4,907,163	+		Psyr_4116	0.77	-3.1
4,907,164	-		Psyr_4116	0.78	-4.9
4,907,282	+				-1.8
4,907,282	+				-1.7
4,907,282	+				-2.0
4,907,282	+				-4.3
4,907,282	+				-1.0
4,907,282	+				-3.3
4,907,282	+				+1.1
4,907,282	+				-4.0
4,907,283	-				-3.6
4,907,283	-				-3.6
4,907,283	-				+0.1
4,907,341	+				-2.0
4,907,508	+		Psyr_4117	0.37	-1.2
4,907,508	+		Psyr_4117	0.37	-0.9
4,907,508	+		Psyr_4117	0.37	-0.4
4,907,509	-		Psyr_4117	0.37	-1.9
4,907,509	-		Psyr_4117	0.37	+0.5
4,907,509	-		Psyr_4117	0.37	+0.2
4,907,512	+		Psyr_4117	0.38	-2.7
4,907,534	+		Psyr_4117	0.43	+3.1
4,907,534	+		Psyr_4117	0.43	+1.7
4,907,534	+		Psyr_4117	0.43	-2.7
4,907,535	-		Psyr_4117	0.43	+1.3
4,907,535	-		Psyr_4117	0.43	+2.1
4,907,538	+		Psyr_4117	0.44	-1.4
4,907,539	-		Psyr_4117	0.44	-0.5
4,907,539	-		Psyr_4117	0.44	+3.9
4,907,539	-		Psyr_4117	0.44	+2.7
4,907,539	-		Psyr_4117	0.44	+0.2
4,907,539	-		Psyr_4117	0.44	-0.6
4,907,596	+		Psyr_4117	0.58	-3.3
4,907,596	+		Psyr_4117	0.58	-1.9
4,907,597	-		Psyr_4117	0.58	-3.5