Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3625

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
4,307,674	-		Psyr_3623	0.86	+0.3
4,307,748	-				+1.9
4,307,798	+				+3.5
4,307,809	+				-1.9
4,308,008	+		Psyr_3624	0.27	-0.6
4,308,009	-		Psyr_3624	0.27	-0.9
4,308,115	+		Psyr_3624	0.39	-1.3
4,308,115	+		Psyr_3624	0.39	-2.7
4,308,115	+		Psyr_3624	0.39	-0.3
4,308,116	-		Psyr_3624	0.40	-3.7
4,308,116	-		Psyr_3624	0.40	+2.7
4,308,116	-		Psyr_3624	0.40	+3.8
4,308,431	-		Psyr_3624	0.75	-1.6
4,308,628	+				+1.2
4,308,816	+		Psyr_3625	0.23	+2.3
4,308,816	+		Psyr_3625	0.23	-1.4
4,308,816	+		Psyr_3625	0.23	+2.9
4,308,816	+		Psyr_3625	0.23	+1.5
4,308,816	+		Psyr_3625	0.23	+1.5
4,308,817	-		Psyr_3625	0.24	-1.7
4,308,817	-		Psyr_3625	0.24	+2.3
4,309,032	+		Psyr_3625	0.53	-0.9
4,309,032	+		Psyr_3625	0.53	-0.1
4,309,032	+		Psyr_3625	0.53	-3.5
4,309,032	+		Psyr_3625	0.53	-2.4
4,309,033	-		Psyr_3625	0.53	+2.5
4,309,033	-		Psyr_3625	0.53	-1.1
4,309,033	-		Psyr_3625	0.53	-1.4
4,309,033	-		Psyr_3625	0.53	-3.5
4,309,174	+		Psyr_3625	0.72	+0.9
4,309,203	+		Psyr_3625	0.76	-2.6
4,309,423	+				-0.9
4,309,517	-				+0.9
4,309,517	-				+0.1
4,309,543	+				+3.9
4,309,543	+				-2.7
4,309,543	+				-0.6
4,309,544	-				+0.1
4,309,544	-				+1.5
4,309,544	-				+4.0
4,309,548	+				-1.7
4,309,549	-				-1.1
4,309,579	+				-1.0
4,309,580	-				-1.4
4,309,664	+		Psyr_3626	0.18	+2.3
4,309,665	-		Psyr_3626	0.18	-1.1
4,309,665	-		Psyr_3626	0.18	+0.9
4,309,694	+		Psyr_3626	0.24	+2.3
4,309,695	-		Psyr_3626	0.24	-0.1
4,309,695	-		Psyr_3626	0.24	-0.1
4,309,727	+		Psyr_3626	0.31	-1.1
4,309,728	-		Psyr_3626	0.31	-0.1
4,309,736	+		Psyr_3626	0.33	+3.4
4,309,950	+		Psyr_3626	0.78	-3.0
4,310,172	+				+1.5
4,310,256	+				-0.1
4,310,256	+				+4.5