Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3523

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
4,198,373	+		Psyr_3522	0.56	-0.4
4,198,374	-		Psyr_3522	0.56	+2.2
4,198,510	+		Psyr_3522	0.66	+1.9
4,198,510	+		Psyr_3522	0.66	-3.2
4,198,510	+		Psyr_3522	0.66	+2.9
4,198,511	-		Psyr_3522	0.66	-1.5
4,198,511	-		Psyr_3522	0.66	-0.5
4,198,511	-		Psyr_3522	0.66	+2.5
4,198,511	-		Psyr_3522	0.66	+0.2
4,198,511	-		Psyr_3522	0.66	+3.5
4,198,643	+		Psyr_3522	0.75	+2.9
4,198,644	-		Psyr_3522	0.76	-3.6
4,198,710	-		Psyr_3522	0.80	+2.9
4,198,740	+		Psyr_3522	0.82	+1.9
4,198,741	-		Psyr_3522	0.83	+0.9
4,198,930	+				+0.2
4,198,930	+				-0.9
4,198,930	+				+2.7
4,198,930	+				+1.5
4,198,931	-				-0.1
4,198,931	-				+2.2
4,198,931	-				-0.4
4,199,006	-				+3.7
4,199,027	+				-0.1
4,199,027	+				+1.9
4,199,027	+				-1.1
4,199,028	-				-0.7
4,199,028	-				-0.7
4,199,074	+				-0.5
4,199,074	+				-0.9
4,199,074	+				-0.3
4,199,082	-				-2.6
4,199,201	-				+1.2
4,199,203	+				+3.9
4,199,257	+		Psyr_3523	0.12	-2.1
4,199,257	+		Psyr_3523	0.12	-1.3
4,199,257	+		Psyr_3523	0.12	+3.3
4,199,257	+		Psyr_3523	0.12	-1.0
4,199,257	+		Psyr_3523	0.12	-3.9
4,199,257	+		Psyr_3523	0.12	-0.5
4,199,257	+		Psyr_3523	0.12	+1.9
4,199,257	+		Psyr_3523	0.12	-0.9
4,199,257	+		Psyr_3523	0.12	+3.5
4,199,258	-		Psyr_3523	0.12	-1.4
4,199,258	-		Psyr_3523	0.12	+0.9
4,199,258	-		Psyr_3523	0.12	+2.9
4,199,258	-		Psyr_3523	0.12	+3.9
4,199,258	-		Psyr_3523	0.12	-0.4
4,199,258	-		Psyr_3523	0.12	-3.0
4,199,258	-		Psyr_3523	0.12	+2.7
4,199,419	+		Psyr_3523	0.26	-0.7
4,199,420	-		Psyr_3523	0.26	-1.5
4,199,815	+		Psyr_3523	0.60	+3.6
4,199,816	-		Psyr_3523	0.60	-0.1
4,200,284	+				+0.9
4,200,284	+				-3.0
4,200,284	+				-2.8
4,200,362	+				+4.0
4,200,362	+				+0.9
4,200,413	+				-1.8
4,200,441	+		Psyr_3524	0.10	+2.2
4,200,441	+				-3.4
4,200,441	+		Psyr_3524	0.10	+0.9
4,200,441	+		Psyr_3524	0.10	-0.1
4,200,441	+		Psyr_3524	0.10	+0.9
4,200,441	+		Psyr_3524	0.10	-0.8
4,200,442	-		Psyr_3524	0.10	-0.4
4,200,442	-		Psyr_3524	0.10	-0.3
4,200,442	-				+1.5
4,200,449	+		Psyr_3524	0.11	-0.1
4,200,635	+		Psyr_3524	0.23	+2.5
4,200,636	-		Psyr_3524	0.23	-0.8
4,200,636	-		Psyr_3524	0.23	-0.7
4,200,636	-		Psyr_3524	0.23	-1.5
4,200,674	+		Psyr_3524	0.26	+2.2
4,200,674	+		Psyr_3524	0.26	+1.9
4,200,674	+		Psyr_3524	0.26	-0.1
4,200,674	+		Psyr_3524	0.26	-4.1
4,200,674	+		Psyr_3524	0.26	-0.9
4,200,674	+		Psyr_3524	0.26	-1.1
4,200,674	+		Psyr_3524	0.26	-1.6
4,200,674	+		Psyr_3524	0.26	-1.6
4,200,674	+		Psyr_3524	0.26	+0.6
4,200,674	+		Psyr_3524	0.26	+2.7
4,200,675	-		Psyr_3524	0.26	+2.7
4,200,675	-		Psyr_3524	0.26	+0.9
4,200,675	-		Psyr_3524	0.26	-1.0
4,200,675	-		Psyr_3524	0.26	-2.3
4,200,675	-		Psyr_3524	0.26	+0.7
4,200,675	-		Psyr_3524	0.26	-2.1
4,200,675	-		Psyr_3524	0.26	-3.1
4,200,675	-		Psyr_3524	0.26	-0.8
4,200,675	-		Psyr_3524	0.26	-0.6
4,200,675	-		Psyr_3524	0.26	-0.7
4,200,675	-		Psyr_3524	0.26	-0.5
4,200,770	+		Psyr_3524	0.32	+1.7
4,200,770	+		Psyr_3524	0.32	-1.0
4,200,770	+		Psyr_3524	0.32	+0.5
4,200,770	+		Psyr_3524	0.32	-0.1
4,200,771	-		Psyr_3524	0.32	+4.0
4,200,771	-		Psyr_3524	0.32	-1.2