Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3308

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,958,317	-		Psyr_3307	0.18	+1.7
3,958,446	+		Psyr_3307	0.29	+0.7
3,958,446	+		Psyr_3307	0.29	-0.7
3,958,446	+		Psyr_3307	0.29	-3.3
3,958,446	+		Psyr_3307	0.29	-0.9
3,958,446	+		Psyr_3307	0.29	-0.9
3,958,446	+		Psyr_3307	0.29	-0.3
3,958,447	-		Psyr_3307	0.29	-1.2
3,958,447	-		Psyr_3307	0.29	-2.1
3,958,447	-		Psyr_3307	0.29	-0.3
3,958,447	-		Psyr_3307	0.29	-0.7
3,958,447	-		Psyr_3307	0.29	+2.9
3,958,447	-		Psyr_3307	0.29	+2.7
3,958,447	-		Psyr_3307	0.29	+3.7
3,958,447	-		Psyr_3307	0.29	+3.8
3,958,447	-		Psyr_3307	0.29	-0.3
3,958,447	-		Psyr_3307	0.29	-0.4
3,958,447	-		Psyr_3307	0.29	-1.9
3,958,542	+		Psyr_3307	0.36	+4.0
3,958,542	+		Psyr_3307	0.36	-0.6
3,958,581	+		Psyr_3307	0.40	-2.3
3,958,582	-		Psyr_3307	0.40	-1.9
3,958,669	+		Psyr_3307	0.47	+0.3
3,958,670	-		Psyr_3307	0.47	-2.6
3,958,701	+		Psyr_3307	0.50	+2.3
3,958,701	+		Psyr_3307	0.50	+2.1
3,958,701	+		Psyr_3307	0.50	+1.3
3,958,702	-		Psyr_3307	0.50	-0.7
3,958,702	-		Psyr_3307	0.50	+2.6
3,958,702	-		Psyr_3307	0.50	+4.3
3,958,702	-		Psyr_3307	0.50	-4.2
3,958,702	-		Psyr_3307	0.50	-1.8
3,958,728	+		Psyr_3307	0.52	+3.7
3,958,729	-		Psyr_3307	0.52	-1.1
3,958,729	-		Psyr_3307	0.52	+1.3
3,958,732	-		Psyr_3307	0.52	-0.3
3,958,732	-		Psyr_3307	0.52	+3.9
3,958,785	+		Psyr_3307	0.56	+0.7
3,958,785	+		Psyr_3307	0.56	+2.1
3,958,785	+		Psyr_3307	0.56	+1.3
3,958,785	+		Psyr_3307	0.56	+3.6
3,958,785	+		Psyr_3307	0.56	-0.6
3,958,786	-		Psyr_3307	0.56	+2.7
3,958,786	-		Psyr_3307	0.56	-0.3
3,958,786	-		Psyr_3307	0.56	-3.1
3,958,786	-		Psyr_3307	0.56	+2.7
3,958,786	-		Psyr_3307	0.56	+3.3
3,958,786	-		Psyr_3307	0.56	-0.2
3,958,791	+		Psyr_3307	0.57	-3.4
3,958,867	+		Psyr_3307	0.63	-3.7
3,958,867	+		Psyr_3307	0.63	-0.8
3,958,867	+		Psyr_3307	0.63	+2.6
3,958,867	+		Psyr_3307	0.63	-0.5
3,958,868	-		Psyr_3307	0.63	+2.9
3,958,868	-		Psyr_3307	0.63	+1.7
3,958,868	-		Psyr_3307	0.63	-1.0
3,958,868	-		Psyr_3307	0.63	-3.8
3,958,868	-		Psyr_3307	0.63	+2.3
3,958,868	-		Psyr_3307	0.63	+1.1
3,959,115	+		Psyr_3307	0.83	-2.3
3,959,115	+		Psyr_3307	0.83	-1.3
3,959,116	-		Psyr_3307	0.84	+0.1
3,959,116	-		Psyr_3307	0.84	-0.3
3,959,116	-		Psyr_3307	0.84	-0.3
3,959,163	+		Psyr_3307	0.87	+3.3
3,959,164	-		Psyr_3307	0.88	+1.3
3,959,172	-		Psyr_3307	0.88	+2.7
3,959,214	+				+0.9
3,959,215	-				+2.1
3,959,215	-				+2.1
3,959,268	+				+4.3
3,959,268	+				+2.3
3,959,268	+				+1.7
3,959,268	+				+1.3
3,959,268	+				-2.6
3,959,269	-				+1.6
3,959,269	-				-5.4
3,959,269	-				+3.3
3,959,269	-				+2.6
3,959,269	-				-1.7
3,959,311	+				-1.6
3,959,312	-				+2.3
3,959,313	+				-0.6
3,959,313	+				-1.6
3,959,313	+				+0.3
3,959,313	+				+0.7
3,959,314	-				+3.7
3,959,576	+		Psyr_3308	0.25	-1.9
3,959,577	-		Psyr_3308	0.25	+0.7
3,959,577	-		Psyr_3308	0.25	+1.3
3,959,577	-		Psyr_3308	0.25	+2.7
3,959,577	-		Psyr_3308	0.25	+1.3
3,959,577	-		Psyr_3308	0.25	+0.7
3,959,587	+		Psyr_3308	0.26	-1.0
3,959,628	+		Psyr_3308	0.29	+3.1
3,959,628	+		Psyr_3308	0.29	+0.2
3,959,628	+		Psyr_3308	0.29	+2.9
3,959,628	+		Psyr_3308	0.29	+2.6
3,959,628	+		Psyr_3308	0.29	+2.7
3,959,628	+		Psyr_3308	0.29	+0.6
3,959,628	+		Psyr_3308	0.29	+1.3
3,959,628	+		Psyr_3308	0.29	+1.7
3,959,628	+		Psyr_3308	0.29	-0.8
3,959,628	+		Psyr_3308	0.29	+3.1
3,959,628	+		Psyr_3308	0.29	+2.6
3,959,629	-		Psyr_3308	0.29	+2.1
3,959,629	-		Psyr_3308	0.29	+1.7
3,959,629	-		Psyr_3308	0.29	-0.7
3,959,629	-		Psyr_3308	0.29	-1.0
3,959,629	-		Psyr_3308	0.29	+1.3
3,959,629	-		Psyr_3308	0.29	+3.3
3,959,629	-		Psyr_3308	0.29	-0.6
3,959,629	-		Psyr_3308	0.29	+1.3
3,959,629	-		Psyr_3308	0.29	+1.3
3,959,633	+		Psyr_3308	0.30	+3.3
3,959,634	-		Psyr_3308	0.30	+2.3
3,959,637	+		Psyr_3308	0.30	-2.2
3,959,637	+		Psyr_3308	0.30	+0.2
3,959,637	+		Psyr_3308	0.30	-0.9
3,959,637	+		Psyr_3308	0.30	-0.9
3,959,638	-		Psyr_3308	0.30	-1.7
3,959,638	-		Psyr_3308	0.30	+0.7
3,959,638	-		Psyr_3308	0.30	-0.3
3,959,724	-		Psyr_3308	0.38	-0.7
3,959,803	+		Psyr_3308	0.45	+1.2
3,959,803	+		Psyr_3308	0.45	+2.3
3,959,803	+		Psyr_3308	0.45	+3.2
3,959,803	+		Psyr_3308	0.45	-0.8
3,959,804	-		Psyr_3308	0.45	+1.3
3,959,804	-		Psyr_3308	0.45	-0.3
3,959,804	-		Psyr_3308	0.45	+2.1
3,959,804	-		Psyr_3308	0.45	+2.7
3,959,804	-		Psyr_3308	0.45	-2.1
3,959,838	+		Psyr_3308	0.48	+0.7
3,960,010	-		Psyr_3308	0.64	-1.7
3,960,054	+		Psyr_3308	0.68	-0.9
3,960,446	+				+1.6
3,960,584	-		Psyr_3309	0.13	-0.6
3,960,652	+		Psyr_3309	0.17	+2.1
3,960,652	+		Psyr_3309	0.17	-4.0
3,960,653	-		Psyr_3309	0.17	-3.1
3,960,653	-		Psyr_3309	0.17	+0.4
3,960,806	+		Psyr_3309	0.28	+1.0
3,960,938	-		Psyr_3309	0.38	-0.3
3,960,991	+		Psyr_3309	0.41	-0.5
3,961,318	+		Psyr_3309	0.64	-2.0
3,961,319	-		Psyr_3309	0.64	+2.3
3,961,394	-		Psyr_3309	0.70	-1.9
3,961,394	-		Psyr_3309	0.70	+1.3