Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3262

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,906,307	+				-3.2
3,906,307	+				-0.3
3,906,307	+				-1.9
3,906,307	+				-0.3
3,906,307	+				+3.1
3,906,307	+				+2.1
3,906,307	+				-0.2
3,906,307	+				-0.9
3,906,307	+				+2.5
3,906,308	-				-0.8
3,906,308	-				+2.7
3,906,308	-				+0.7
3,906,308	-				+3.1
3,906,308	-				+2.1
3,906,435	+				+1.7
3,906,435	+				+3.6
3,906,478	+				+3.6
3,906,487	-				+0.5
3,906,489	+				-0.7
3,906,700	+		Psyr_3262	0.14	-2.9
3,906,700	+		Psyr_3262	0.14	-2.8
3,906,700	+		Psyr_3262	0.14	+2.1
3,906,701	-		Psyr_3262	0.15	-3.2
3,906,701	-		Psyr_3262	0.15	+2.1
3,907,006	+				+2.5
3,907,006	+				+2.3
3,907,006	+				+2.5
3,907,006	+				+2.1
3,907,007	-				-1.4
3,907,007	-				-1.1
3,907,007	-				-1.6
3,907,049	-				-1.7
3,907,096	+				+2.3
3,907,097	-				-0.6
3,907,136	+				+1.1
3,907,421	-				+3.3
3,907,434	+				+2.7
3,907,434	+				+0.7
3,907,434	+				+3.9
3,907,435	-				-1.6
3,907,435	-				+2.1
3,907,435	-				-0.4
3,907,435	-				-2.5
3,907,702	+		Psyr_3263	0.34	-2.5
3,907,702	+		Psyr_3263	0.34	+3.8
3,907,702	+				+0.7
3,907,702	+		Psyr_3263	0.34	+2.5
3,907,703	-		Psyr_3263	0.35	+0.2
3,907,703	-		Psyr_3263	0.35	+0.4
3,907,734	+		Psyr_3263	0.38	-2.1
3,907,734	+		Psyr_3263	0.38	-1.1
3,907,734	+		Psyr_3263	0.38	+2.3
3,907,735	-		Psyr_3263	0.38	+1.7
3,907,735	-		Psyr_3263	0.38	+4.9
3,907,735	-		Psyr_3263	0.38	+0.7
3,907,735	-		Psyr_3263	0.38	+2.1
3,907,740	+				+1.7
3,907,740	+		Psyr_3263	0.38	+0.1
3,907,740	+		Psyr_3263	0.38	+3.6
3,907,741	-		Psyr_3263	0.38	+0.7
3,907,741	-		Psyr_3263	0.38	-2.6
3,907,741	-		Psyr_3263	0.38	+2.3
3,907,741	-		Psyr_3263	0.38	+3.1
3,907,741	-		Psyr_3263	0.38	-4.5
3,907,759	-		Psyr_3263	0.40	+2.3
3,907,836	+		Psyr_3263	0.47	-1.1
3,907,837	-		Psyr_3263	0.48	-1.7
3,907,875	+		Psyr_3263	0.51	+3.1
3,907,944	-		Psyr_3263	0.58	+0.2
3,907,945	+		Psyr_3263	0.58	+2.1
3,907,945	+		Psyr_3263	0.58	-0.5
3,907,945	+		Psyr_3263	0.58	+1.2
3,907,945	+		Psyr_3263	0.58	+1.7
3,907,945	+		Psyr_3263	0.58	-0.3
3,907,945	+		Psyr_3263	0.58	-1.5
3,907,946	-		Psyr_3263	0.58	+3.5