Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3179

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,805,193	+				+1.8
3,805,193	+				-2.0
3,805,193	+				+2.9
3,805,193	+				-3.0
3,805,193	+				-2.0
3,805,193	+				-0.8
3,805,193	+				-3.9
3,805,193	+				-1.5
3,805,193	+				-0.5
3,805,193	+				+0.9
3,805,193	+				+3.5
3,805,193	+				-2.1
3,805,193	+				+1.3
3,805,193	+				+2.1
3,805,193	+				+1.3
3,805,194	-				-1.6
3,805,194	-				+3.1
3,805,194	-				-1.3
3,805,194	-				+2.3
3,805,194	-				+1.0
3,805,194	-				-0.1
3,805,194	-				-1.2
3,805,194	-				+1.8
3,805,194	-				+3.8
3,805,194	-				-0.9
3,805,212	+				+3.6
3,805,212	+				-1.4
3,805,212	+				+3.7
3,805,212	+				+3.5
3,805,212	+				+1.6
3,805,212	+				+1.3
3,805,213	-				-3.3
3,805,213	-				+3.7
3,805,213	-				+0.4
3,805,213	-				-0.1
3,805,213	-				-2.1
3,805,213	-				+2.9
3,805,213	-				-0.2
3,805,213	-				-1.9
3,805,305	+				-0.2
3,805,305	+				-1.7
3,805,306	-				+0.8
3,806,404	-		Psyr_3179	0.17	+2.1
3,806,488	-		Psyr_3179	0.20	-2.9
3,806,721	-		Psyr_3179	0.30	-2.2
3,806,795	-		Psyr_3179	0.33	-0.2
3,806,795	-		Psyr_3179	0.33	-5.0
3,806,795	-		Psyr_3179	0.33	+1.3
3,806,795	-		Psyr_3179	0.33	-0.2
3,806,916	-		Psyr_3179	0.38	-0.2
3,806,916	-		Psyr_3179	0.38	-1.4
3,808,281	-				-3.4
3,808,505	+				-0.2
3,808,567	-				+2.3
3,808,575	-				+1.8
3,808,682	-				-2.6
3,808,682	-				+1.3
3,808,715	-				-1.8
3,809,198	-		Psyr_3180	0.46	-0.3
3,809,239	+		Psyr_3180	0.52	-1.2
3,809,240	-		Psyr_3180	0.52	-1.9
3,809,240	-		Psyr_3180	0.52	-1.1
3,809,271	+		Psyr_3180	0.57	-0.7
3,809,271	+		Psyr_3180	0.57	+0.8
3,809,272	-		Psyr_3180	0.57	+2.1
3,809,315	-		Psyr_3180	0.63	-1.0