Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3107

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,724,503	-		Psyr_3106	0.84	-1.6
3,724,532	+		Psyr_3106	0.87	+2.9
3,724,588	+				-3.0
3,724,589	-				+1.8
3,724,589	-				+1.3
3,724,589	-				+0.8
3,724,589	-				+2.6
3,724,674	+				+0.3
3,724,675	-				+1.8
3,724,675	-				+3.3
3,724,708	+				-2.2
3,724,708	+				-1.4
3,724,708	+				+0.4
3,724,708	+				-1.3
3,724,709	-				+2.3
3,724,709	-				+1.5
3,724,751	+				+3.8
3,724,863	-				-2.1
3,724,863	-				+3.3
3,724,863	-				+2.8
3,724,924	-				+2.1
3,724,980	+				-0.6
3,724,987	-				+2.3
3,724,987	-				+0.7
3,725,082	-				-3.9
3,725,102	+				+3.6
3,725,103	-				-0.2
3,725,132	+				-2.0
3,725,132	+				-2.0
3,725,133	-				-0.3
3,725,161	+				+3.3
3,725,162	-				+0.8
3,725,166	+				+0.1
3,725,166	+				+2.6
3,725,181	-				+1.3
3,725,236	+		Psyr_3107	0.17	+0.8
3,725,236	+		Psyr_3107	0.17	-1.1
3,725,236	+		Psyr_3107	0.17	-1.8
3,725,237	-		Psyr_3107	0.18	-1.2
3,725,237	-		Psyr_3107	0.18	-0.7
3,725,237	-		Psyr_3107	0.18	-2.3
3,725,483	-				+3.8
3,725,524	-				+2.8
3,725,546	+				-2.0
3,725,547	-				-0.2
3,725,550	+				+0.3
3,725,576	+				+3.8
3,725,576	+				+0.3
3,725,577	-				+0.8
3,725,577	-				-0.1
3,725,577	-				-0.2
3,725,590	+				+2.3
3,725,591	-				+1.8
3,725,591	-				+2.6
3,725,591	-				+1.8
3,725,922	+				-0.1
3,725,922	+				-0.2
3,725,923	-				-1.5
3,725,923	-				+3.5
3,726,083	+		Psyr_3109	0.14	-1.7
3,726,083	+		Psyr_3109	0.14	+1.5
3,726,083	+		Psyr_3109	0.14	+4.6
3,726,083	+		Psyr_3109	0.14	+3.7
3,726,084	-		Psyr_3109	0.14	+2.6
3,726,084	-		Psyr_3109	0.14	-1.3
3,726,084	-		Psyr_3109	0.14	+1.2
3,726,084	-		Psyr_3109	0.14	-2.1
3,726,183	-		Psyr_3109	0.20	+0.2
3,726,205	-		Psyr_3109	0.21	-0.1
3,726,240	+		Psyr_3109	0.23	-1.0
3,726,241	-		Psyr_3109	0.23	+1.8
3,726,279	-		Psyr_3109	0.26	-0.8
3,726,297	+		Psyr_3109	0.27	-3.3
3,726,297	+		Psyr_3109	0.27	-0.1
3,726,297	+		Psyr_3109	0.27	-0.1
3,726,298	-		Psyr_3109	0.27	-1.0
3,726,298	-		Psyr_3109	0.27	-0.2
3,726,298	-		Psyr_3109	0.27	-0.9
3,726,298	-		Psyr_3109	0.27	+1.8
3,726,298	-		Psyr_3109	0.27	+2.3
3,726,426	+		Psyr_3109	0.34	+3.1
3,726,426	+		Psyr_3109	0.34	-1.8
3,726,427	-		Psyr_3109	0.34	-2.2
3,726,427	-		Psyr_3109	0.34	-0.2
3,726,427	-		Psyr_3109	0.34	-1.4
3,726,427	-		Psyr_3109	0.34	+3.5
3,726,468	-		Psyr_3109	0.37	+3.1