Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3106

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,722,693	+		Psyr_3105	0.12	-1.6
3,722,693	+		Psyr_3105	0.12	+1.8
3,722,862	-		Psyr_3105	0.29	+0.8
3,722,913	-		Psyr_3105	0.34	-1.0
3,723,146	+		Psyr_3105	0.58	+2.1
3,723,146	+		Psyr_3105	0.58	-3.0
3,723,147	-		Psyr_3105	0.58	-1.1
3,723,147	-		Psyr_3105	0.58	-2.2
3,723,417	+		Psyr_3105	0.85	+2.1
3,723,417	+		Psyr_3105	0.85	-3.4
3,723,417	+		Psyr_3105	0.85	-3.3
3,723,417	+		Psyr_3105	0.85	+2.3
3,723,418	-		Psyr_3105	0.85	+2.8
3,723,418	-		Psyr_3105	0.85	-0.8
3,723,418	-		Psyr_3105	0.85	+0.7
3,723,548	+				+0.8
3,723,650	+				-1.5
3,723,650	+				-3.2
3,723,650	+				-4.8
3,723,651	-				-0.8
3,723,651	-				-2.3
3,723,651	-				+1.3
3,723,651	-				+2.1
3,723,651	-				+3.3
3,723,712	+				-0.2
3,723,713	-				-1.4
3,723,713	-				+2.1
3,723,713	-				+3.6
3,723,713	-				-1.9
3,723,713	-				+3.5
3,723,713	-				+3.9
3,723,713	-				-1.5
3,723,713	-				+3.2
3,723,713	-				-1.1
3,723,716	+				+2.3
3,723,716	+				-1.1
3,723,717	-				+2.1
3,723,717	-				-2.1
3,723,812	+		Psyr_3106	0.16	+3.2
3,723,813	-		Psyr_3106	0.16	+1.8
3,723,813	-		Psyr_3106	0.16	-0.5
3,723,813	-		Psyr_3106	0.16	+3.8
3,724,014	-		Psyr_3106	0.36	+2.6
3,724,052	+		Psyr_3106	0.40	+2.8
3,724,052	+		Psyr_3106	0.40	-0.1
3,724,053	-		Psyr_3106	0.40	+3.1
3,724,102	+		Psyr_3106	0.44	+3.6
3,724,157	+		Psyr_3106	0.50	-1.1
3,724,157	+		Psyr_3106	0.50	-1.5
3,724,158	-		Psyr_3106	0.50	+3.6
3,724,158	-		Psyr_3106	0.50	+3.3
3,724,158	-		Psyr_3106	0.50	+0.8
3,724,172	+		Psyr_3106	0.51	-0.2
3,724,172	+		Psyr_3106	0.51	+3.6
3,724,172	+		Psyr_3106	0.51	+1.8
3,724,173	-		Psyr_3106	0.51	+1.8
3,724,173	-		Psyr_3106	0.51	+2.3
3,724,173	-		Psyr_3106	0.51	+2.9
3,724,173	-		Psyr_3106	0.51	-0.8
3,724,173	-		Psyr_3106	0.51	+1.3
3,724,173	-		Psyr_3106	0.51	+2.6
3,724,503	-		Psyr_3106	0.84	-1.6
3,724,532	+		Psyr_3106	0.87	+2.9
3,724,588	+				-3.0
3,724,589	-				+1.8
3,724,589	-				+1.3
3,724,589	-				+0.8
3,724,589	-				+2.6
3,724,674	+				+0.3
3,724,675	-				+1.8
3,724,675	-				+3.3
3,724,708	+				-2.2
3,724,708	+				-1.4
3,724,708	+				+0.4
3,724,708	+				-1.3
3,724,709	-				+2.3
3,724,709	-				+1.5
3,724,751	+				+3.8
3,724,863	-				-2.1
3,724,863	-				+3.3
3,724,863	-				+2.8
3,724,924	-				+2.1
3,724,980	+				-0.6
3,724,987	-				+2.3
3,724,987	-				+0.7
3,725,082	-				-3.9
3,725,102	+				+3.6
3,725,103	-				-0.2
3,725,132	+				-2.0
3,725,132	+				-2.0
3,725,133	-				-0.3
3,725,161	+				+3.3
3,725,162	-				+0.8
3,725,166	+				+0.1
3,725,166	+				+2.6
3,725,181	-				+1.3
3,725,236	+		Psyr_3107	0.17	+0.8
3,725,236	+		Psyr_3107	0.17	-1.1
3,725,236	+		Psyr_3107	0.17	-1.8
3,725,237	-		Psyr_3107	0.18	-1.2
3,725,237	-		Psyr_3107	0.18	-0.7
3,725,237	-		Psyr_3107	0.18	-2.3
3,725,483	-				+3.8
3,725,524	-				+2.8
3,725,546	+				-2.0
3,725,547	-				-0.2
3,725,550	+				+0.3
3,725,576	+				+3.8
3,725,576	+				+0.3
3,725,577	-				+0.8
3,725,577	-				-0.1
3,725,577	-				-0.2
3,725,590	+				+2.3
3,725,591	-				+1.8
3,725,591	-				+2.6
3,725,591	-				+1.8