Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3102

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,719,010	+		Psyr_3101	0.27	-1.6
3,719,010	+		Psyr_3101	0.27	+1.8
3,719,091	+		Psyr_3101	0.36	+2.1
3,719,092	-		Psyr_3101	0.36	-1.2
3,719,115	+		Psyr_3101	0.38	+3.2
3,719,119	-		Psyr_3101	0.38	+0.8
3,719,119	-		Psyr_3101	0.38	-2.4
3,719,119	-		Psyr_3101	0.38	-0.2
3,719,391	+		Psyr_3101	0.66	+2.3
3,719,569	+		Psyr_3101	0.83	-0.5
3,719,569	+		Psyr_3101	0.83	+0.8
3,719,569	+		Psyr_3101	0.83	-0.2
3,719,569	+		Psyr_3101	0.83	+2.1
3,719,570	-		Psyr_3101	0.83	+1.0
3,719,570	-		Psyr_3101	0.83	+2.1
3,719,570	-		Psyr_3101	0.83	+1.3
3,719,570	-		Psyr_3101	0.83	+1.5
3,719,571	+		Psyr_3101	0.84	+0.8
3,719,571	+		Psyr_3101	0.84	+2.1
3,719,571	+		Psyr_3101	0.84	+0.8
3,719,572	-		Psyr_3101	0.84	+0.7
3,719,751	-				+1.3
3,719,751	-				+1.5
3,719,754	+				+0.8
3,719,754	+				+3.2
3,719,754	+				+2.1
3,719,755	-				+0.5
3,719,755	-				-0.8
3,719,755	-				+2.1
3,719,802	+				-2.5
3,719,802	+				+1.8
3,719,803	-				+3.8
3,719,922	-				+3.1
3,719,938	+				+0.8
3,720,168	-		Psyr_3102	0.20	-1.1
3,720,168	-		Psyr_3102	0.20	+2.3
3,720,402	-		Psyr_3102	0.45	+1.8
3,720,402	-		Psyr_3102	0.45	+3.5
3,720,402	-		Psyr_3102	0.45	+3.1
3,720,402	-		Psyr_3102	0.45	+1.8
3,720,496	+		Psyr_3102	0.55	+2.3
3,720,759	+		Psyr_3102	0.84	+3.1
3,720,760	-		Psyr_3102	0.84	+2.6
3,720,760	-		Psyr_3102	0.84	-1.3
3,720,760	-		Psyr_3102	0.84	+2.9
3,720,760	-		Psyr_3102	0.84	-1.2
3,720,760	-		Psyr_3102	0.84	-0.2
3,720,934	+				+2.1
3,720,934	+				-0.2
3,720,934	+				-0.7
3,720,935	-				+0.1
3,720,935	-				-1.3
3,720,935	-				-1.4
3,721,024	+		Psyr_3103	0.14	+0.0
3,721,024	+		Psyr_3103	0.14	-0.0
3,721,025	-		Psyr_3103	0.14	-1.0
3,721,090	-		Psyr_3103	0.23	+3.3
3,721,090	-		Psyr_3103	0.23	+1.7
3,721,363	+		Psyr_3103	0.58	-3.9
3,721,435	+		Psyr_3103	0.67	-2.9
3,721,498	+		Psyr_3103	0.75	-0.6
3,721,508	-		Psyr_3103	0.76	+3.1
3,721,508	-		Psyr_3103	0.76	-2.2
3,721,718	+				+3.5
3,721,745	+				-1.9
3,721,746	-				+2.8