Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3093

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,707,325	-		Psyr_3091	0.88	-3.1
3,707,427	-				+2.6
3,707,540	+		Psyr_3092	0.13	-2.2
3,707,540	+		Psyr_3092	0.13	+2.6
3,707,540	+		Psyr_3092	0.13	-4.0
3,707,540	+		Psyr_3092	0.13	+3.1
3,707,541	-		Psyr_3092	0.13	-1.8
3,707,565	+		Psyr_3092	0.16	-0.9
3,707,643	-		Psyr_3092	0.25	+2.8
3,707,643	-		Psyr_3092	0.25	-1.4
3,707,718	-		Psyr_3092	0.34	+1.4
3,707,718	-		Psyr_3092	0.34	-2.4
3,707,837	+		Psyr_3092	0.47	-0.6
3,707,837	+		Psyr_3092	0.47	+2.6
3,707,837	+		Psyr_3092	0.47	+2.6
3,707,838	-		Psyr_3092	0.47	-0.7
3,707,838	-		Psyr_3092	0.47	+2.9
3,708,017	+		Psyr_3092	0.68	-2.8
3,708,018	-		Psyr_3092	0.68	-3.6
3,708,018	-		Psyr_3092	0.68	+2.6
3,708,214	-				-1.1
3,708,214	-				-2.6
3,708,245	-				+2.6
3,708,375	+		Psyr_3093	0.12	-2.0
3,708,375	+		Psyr_3093	0.12	-3.0
3,708,376	-				-1.5
3,708,401	-		Psyr_3093	0.15	+4.4
3,708,695	+		Psyr_3093	0.58	-1.2
3,708,695	+		Psyr_3093	0.58	-0.2
3,708,696	-		Psyr_3093	0.58	+0.0
3,708,862	+		Psyr_3093	0.82	-1.7
3,708,863	-				-0.2
3,708,863	-		Psyr_3093	0.82	+2.6
3,708,960	+				+2.6
3,708,960	+				+2.1
3,708,960	+				-0.5
3,708,960	+				-2.8
3,708,961	-				-0.5
3,709,012	+				+3.3
3,709,012	+				+2.9
3,709,012	+				-0.6
3,709,012	+				-0.2
3,709,012	+				+3.5
3,709,012	+				+0.8
3,709,012	+				+2.9
3,709,012	+				+3.7
3,709,012	+				-0.2
3,709,012	+				+3.6
3,709,012	+				-1.4
3,709,013	-				+2.3
3,709,013	-				+2.3
3,709,013	-				-0.4
3,709,013	-				+1.8
3,709,013	-				-2.8
3,709,013	-				+0.1
3,709,013	-				-1.6
3,709,013	-				+2.8
3,709,071	+				+1.3
3,709,071	+				+0.8
3,709,071	+				+4.3
3,709,071	+				+1.3
3,709,072	-				+1.8
3,709,072	-				+3.1
3,709,195	+				-5.0
3,709,308	+				+2.6
3,709,340	+				-0.2
3,709,340	+				-1.8
3,709,341	-				+2.1
3,709,341	-				+0.8
3,709,341	-				-0.9
3,709,399	+				+2.6
3,709,861	+		Psyr_3094	0.22	+1.3
3,709,861	+		Psyr_3094	0.22	+2.3
3,709,861	+		Psyr_3094	0.22	-0.2
3,709,861	+		Psyr_3094	0.22	+1.8
3,709,862	-		Psyr_3094	0.22	-1.2