Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3050

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,646,779	+				+1.8
3,646,779	+				-0.2
3,646,800	+				-2.2
3,646,800	+				-1.8
3,646,800	+				-1.5
3,646,801	-				-1.8
3,646,801	-				-0.4
3,646,803	-				+1.8
3,646,832	+				-2.6
3,646,921	-				+2.1
3,647,080	+		Psyr_3049	0.25	+3.0
3,647,080	+		Psyr_3049	0.25	-0.1
3,647,080	+		Psyr_3049	0.25	+1.4
3,647,080	+		Psyr_3049	0.25	+1.4
3,647,080	+		Psyr_3049	0.25	-1.6
3,647,081	-		Psyr_3049	0.25	+1.4
3,647,081	-		Psyr_3049	0.25	+0.8
3,647,081	-		Psyr_3049	0.25	+1.8
3,647,081	-		Psyr_3049	0.25	-2.4
3,647,081	-		Psyr_3049	0.25	-2.4
3,647,104	+		Psyr_3049	0.28	-1.2
3,647,104	+		Psyr_3049	0.28	+2.1
3,647,104	+		Psyr_3049	0.28	+1.4
3,647,104	+		Psyr_3049	0.28	+1.4
3,647,276	+		Psyr_3049	0.48	-3.1
3,647,276	+		Psyr_3049	0.48	-1.2
3,647,276	+		Psyr_3049	0.48	+3.2
3,647,276	+		Psyr_3049	0.48	+1.8
3,647,276	+		Psyr_3049	0.48	-0.2
3,647,276	+		Psyr_3049	0.48	+0.5
3,647,277	-		Psyr_3049	0.48	-2.8
3,647,277	-		Psyr_3049	0.48	+1.4
3,647,277	-		Psyr_3049	0.48	-1.4
3,647,278	+		Psyr_3049	0.48	+0.3
3,647,278	+		Psyr_3049	0.48	-0.5
3,647,279	-		Psyr_3049	0.49	-1.7
3,647,279	-		Psyr_3049	0.49	-1.1
3,647,380	+		Psyr_3049	0.61	+1.8
3,647,381	-		Psyr_3049	0.61	-0.7
3,647,390	+		Psyr_3049	0.62	-0.7
3,647,391	-		Psyr_3049	0.62	+2.8
3,647,391	-		Psyr_3049	0.62	+1.4
3,647,397	-		Psyr_3049	0.63	-0.5
3,647,440	-		Psyr_3049	0.68	+3.7
3,647,444	+		Psyr_3049	0.68	+0.8
3,647,445	-		Psyr_3049	0.68	+0.4
3,647,617	+		Psyr_3049	0.89	-0.9
3,647,617	+		Psyr_3049	0.89	-3.3
3,647,666	+				-0.4
3,647,667	-				+1.8
3,647,667	-				+0.9
3,647,770	+				-0.2
3,647,771	-				+3.2
3,647,771	-				-1.5
3,647,778	+				+0.5
3,647,779	-				-2.8
3,648,015	+		Psyr_3050	0.28	+1.6
3,648,015	+		Psyr_3050	0.28	-1.3
3,648,015	+		Psyr_3050	0.28	+0.8
3,648,015	+		Psyr_3050	0.28	+1.8
3,648,015	+		Psyr_3050	0.28	+2.1
3,648,015	+		Psyr_3050	0.28	-0.2
3,648,016	-		Psyr_3050	0.28	+1.8
3,648,016	-		Psyr_3050	0.28	+2.6
3,648,079	-		Psyr_3050	0.35	+2.6
3,648,079	-		Psyr_3050	0.35	+3.1
3,648,454	-		Psyr_3050	0.78	+0.0
3,648,479	+		Psyr_3050	0.81	+2.4
3,648,577	-				-2.0
3,648,616	+				+0.1
3,648,616	+				-0.9
3,648,616	+				+2.8
3,648,616	+				+2.6
3,648,617	-				-2.9
3,648,617	-				-0.5
3,648,617	-				+3.0
3,648,617	-				+3.5
3,648,617	-				+2.6
3,648,617	-				+4.3
3,648,674	+				-2.2
3,648,675	-				+0.8
3,648,676	+				+2.1
3,648,693	-				+2.8
3,648,724	+				-0.2
3,648,963	+		Psyr_3051	0.22	-0.3
3,648,964	-		Psyr_3051	0.22	-0.6
3,648,973	-		Psyr_3051	0.23	+0.8
3,648,973	-		Psyr_3051	0.23	+0.6
3,649,120	+		Psyr_3051	0.39	-0.7
3,649,286	-		Psyr_3051	0.58	+0.4
3,649,384	+		Psyr_3051	0.69	+0.7
3,649,588	+				-3.8
3,649,594	+				+2.6
3,649,595	-				-1.5
3,649,595	-				-0.2