Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2981

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,573,783	+		Psyr_2980	0.39	-4.8
3,573,783	+		Psyr_2980	0.39	+0.7
3,573,783	+		Psyr_2980	0.39	-0.3
3,573,784	-		Psyr_2980	0.40	-5.0
3,573,784	-		Psyr_2980	0.40	-0.0
3,573,784	-		Psyr_2980	0.40	+2.3
3,574,084	-		Psyr_2980	0.75	-4.7
3,574,180	-		Psyr_2980	0.87	-4.4
3,574,333	+				+0.7
3,574,333	+				+2.5
3,574,334	-				+2.1
3,574,353	+				-0.3
3,574,353	+				-1.6
3,574,354	-				+4.3
3,574,354	-				+0.5
3,574,386	+				+2.9
3,574,394	+				+0.4
3,574,394	+				-2.8
3,574,401	-				+3.4
3,574,406	+				-0.9
3,574,406	+				+2.9
3,574,406	+				-0.3
3,574,406	+				-3.1
3,574,406	+				-2.3
3,574,407	-				-1.0
3,574,407	-				+0.7
3,574,407	-				-2.0
3,574,407	-				-1.2
3,574,407	-				-2.1
3,574,407	-				+1.3
3,574,426	-				-0.3
3,574,438	+				-0.3
3,574,438	+				-3.3
3,574,438	+				-2.0
3,574,438	+				-0.8
3,574,439	-				+0.7
3,574,439	-				+2.3
3,574,439	-				+2.3
3,574,439	-				+2.7
3,574,461	-				+3.1
3,574,471	-				-1.5
3,574,521	+				+2.9
3,574,521	+				-0.3
3,574,521	+				+0.7
3,574,522	-				-1.8
3,574,522	-				-0.3
3,574,522	-				+4.6
3,574,522	-				-3.1
3,574,522	-				-2.7
3,574,573	+				-1.2
3,574,573	+				+2.7
3,574,574	-				-1.3
3,574,574	-				+0.3
3,574,574	-				-1.3
3,574,605	+				+2.1
3,574,605	+				+2.6
3,574,605	+				-1.1
3,574,605	+				+2.1
3,574,605	+				+2.9
3,574,606	-				-1.8
3,574,606	-				+3.5
3,574,609	-				-0.6
3,574,646	+				+0.5
3,574,730	+		Psyr_2981	0.23	+1.3
3,574,730	+		Psyr_2981	0.23	+2.3
3,574,943	+				+3.4
3,574,944	-				-0.3
3,575,118	+		Psyr_2982	0.33	-1.1
3,575,282	+		Psyr_2982	0.79	-2.5
3,575,282	+		Psyr_2982	0.79	-0.7
3,575,282	+		Psyr_2982	0.79	-2.3
3,575,282	+		Psyr_2982	0.79	+2.3
3,575,282	+		Psyr_2982	0.79	+1.7
3,575,283	-		Psyr_2982	0.80	+2.9
3,575,283	-		Psyr_2982	0.80	-0.3
3,575,283	-		Psyr_2982	0.80	-1.7
3,575,334	+				+1.7
3,575,334	+				+3.5
3,575,337	+				+0.7
3,575,337	+				-4.1
3,575,337	+				-1.5
3,575,338	-				-1.3
3,575,338	-				-1.3
3,575,369	+				+1.7
3,575,369	+				+2.7
3,575,370	-				+2.1
3,575,370	-				-1.2
3,575,379	-				+2.3
3,575,399	+				-4.7
3,575,399	+				+4.5
3,575,399	+				+2.7
3,575,400	-				+1.7
3,575,400	-				+2.5
3,575,400	-				-0.5
3,575,442	-				-2.9
3,575,442	-				-1.1
3,575,533	-				+2.0
3,575,533	-				+0.7
3,575,596	+		Psyr_2983	0.24	-0.3
3,575,654	+		Psyr_2983	0.43	+0.7
3,575,654	+		Psyr_2983	0.43	-1.3
3,575,654	+		Psyr_2983	0.43	+1.7
3,575,654	+		Psyr_2983	0.43	-0.3
3,575,654	+		Psyr_2983	0.43	+0.7
3,575,655	-		Psyr_2983	0.43	+2.1
3,575,655	-		Psyr_2983	0.43	+2.5
3,575,655	-		Psyr_2983	0.43	+0.7
3,575,655	-		Psyr_2983	0.43	+0.7
3,575,655	-		Psyr_2983	0.43	+4.1
3,575,655	-		Psyr_2983	0.43	+2.7
3,575,655	-		Psyr_2983	0.43	-0.9
3,575,655	-		Psyr_2983	0.43	+0.3
3,575,655	-		Psyr_2983	0.43	+0.7
3,575,655	-		Psyr_2983	0.43	-1.3
3,575,655	-		Psyr_2983	0.43	+3.8
3,575,884	+		Psyr_2984	0.23	-2.6