Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2970

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,561,930	+		Psyr_2969	0.79	+2.5
3,561,930	+		Psyr_2969	0.79	+2.5
3,561,930	+		Psyr_2969	0.79	-1.9
3,561,931	-		Psyr_2969	0.79	-0.3
3,561,931	-		Psyr_2969	0.79	-0.3
3,561,931	-		Psyr_2969	0.79	-0.4
3,561,931	-		Psyr_2969	0.79	+2.1
3,561,931	-		Psyr_2969	0.79	-0.3
3,561,931	-		Psyr_2969	0.79	-0.3
3,562,185	+				+2.3
3,562,185	+				-3.6
3,562,185	+				-0.3
3,562,185	+				-2.7
3,562,185	+				+0.7
3,562,185	+				+1.3
3,562,186	-				-4.5
3,562,186	-				-2.0
3,562,186	-				+3.1
3,562,186	-				+1.7
3,562,186	-				+0.7
3,562,186	-				+0.7
3,562,381	-				-0.3
3,562,519	-		Psyr_2970	0.14	-2.3
3,562,522	+		Psyr_2970	0.14	+1.3
3,562,522	+		Psyr_2970	0.14	-3.4
3,562,522	+		Psyr_2970	0.14	-1.4
3,562,523	-		Psyr_2970	0.14	-1.6
3,562,523	-		Psyr_2970	0.14	-1.6
3,562,523	-		Psyr_2970	0.14	+1.7
3,562,523	-		Psyr_2970	0.14	+1.7
3,562,523	-		Psyr_2970	0.14	+2.3
3,562,523	-		Psyr_2970	0.14	-0.3
3,562,862	-		Psyr_2970	0.45	+3.2
3,562,862	-		Psyr_2970	0.45	+0.7
3,562,958	-		Psyr_2970	0.54	-2.7
3,562,997	+		Psyr_2970	0.58	+2.3
3,563,057	+		Psyr_2970	0.63	-3.6
3,563,511	-				+1.7
3,563,648	+				-1.8
3,563,653	+				-1.1
3,563,653	+				-0.6
3,563,654	-				-2.6
3,563,654	-				+3.1
3,563,670	+				-0.3
3,563,739	+				+3.2
3,563,786	+				+3.1
3,563,787	-				-2.7
3,563,788	+				+3.4
3,563,788	+				+1.0
3,563,788	+				+0.8
3,563,789	-				+3.1
3,563,789	-				+1.7
3,563,792	+				-3.0
3,563,792	+				+2.3
3,563,908	-				-1.1
3,563,926	+				-2.0
3,563,926	+				-2.5
3,563,927	-				-0.3
3,563,927	-				-0.3
3,563,939	+				+2.9
3,563,939	+				+1.7
3,563,940	-				+2.3
3,563,941	+				-0.4
3,563,941	+				-3.7
3,563,941	+				+1.3
3,563,944	+				-1.6
3,563,944	+				+1.3
3,563,944	+				+2.1
3,563,944	+				-0.3
3,563,944	+				+1.3
3,563,945	-				-1.7
3,564,194	-				+1.7
3,564,194	-		Psyr_2971	0.68	-2.8
3,564,279	-				+1.3
3,564,279	-				-0.3
3,564,279	-				-0.3
3,564,353	-				+2.3
3,564,443	+				-1.5
3,564,445	+				+1.3
3,564,446	-				-1.4
3,564,446	-				+4.1
3,564,446	-				-3.4
3,564,446	-				-0.7
3,564,446	-				+2.1
3,564,454	-				-0.3