Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2944

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,533,586	+		Psyr_2942	0.62	+3.9
3,533,611	+		Psyr_2942	0.65	-1.3
3,533,611	+		Psyr_2942	0.65	-1.5
3,533,611	+		Psyr_2942	0.65	+1.0
3,533,612	-		Psyr_2942	0.66	+3.5
3,533,612	-		Psyr_2942	0.66	+4.1
3,533,612	-		Psyr_2942	0.66	+1.3
3,533,932	+				+3.2
3,533,958	+		Psyr_2943	0.13	-3.4
3,533,959	-		Psyr_2943	0.13	-1.6
3,533,977	-		Psyr_2943	0.16	-0.6
3,534,067	-		Psyr_2943	0.30	+1.3
3,534,067	-		Psyr_2943	0.30	-2.5
3,534,067	-		Psyr_2943	0.30	-1.0
3,534,067	-		Psyr_2943	0.30	-2.2
3,534,114	-		Psyr_2943	0.37	-1.6
3,534,126	+		Psyr_2943	0.39	+1.3
3,534,126	+		Psyr_2943	0.39	-3.2
3,534,127	-		Psyr_2943	0.39	+2.9
3,534,127	-		Psyr_2943	0.39	-2.6
3,534,127	-		Psyr_2943	0.39	-2.7
3,534,127	-		Psyr_2943	0.39	+0.8
3,534,312	+		Psyr_2943	0.67	-0.2
3,534,312	+		Psyr_2943	0.67	+1.8
3,534,313	-		Psyr_2943	0.67	+4.0
3,534,354	+		Psyr_2943	0.73	+3.1
3,534,424	+		Psyr_2943	0.84	-0.4
3,534,619	+		Psyr_2944	0.16	+1.3
3,534,629	-		Psyr_2944	0.18	-1.8
3,534,631	+		Psyr_2944	0.18	-1.5
3,534,632	-		Psyr_2944	0.18	-0.5
3,534,632	-		Psyr_2944	0.18	+1.8
3,534,643	+		Psyr_2944	0.20	-4.8
3,534,643	+		Psyr_2944	0.20	-0.9
3,534,643	+		Psyr_2944	0.20	-1.7
3,534,643	+		Psyr_2944	0.20	+0.8
3,534,643	+		Psyr_2944	0.20	-0.2
3,534,643	+		Psyr_2944	0.20	-0.2
3,534,643	+		Psyr_2944	0.20	-1.8
3,534,644	-		Psyr_2944	0.20	-0.2
3,534,644	-		Psyr_2944	0.20	+3.2
3,534,644	-		Psyr_2944	0.20	+3.2
3,534,644	-		Psyr_2944	0.20	-2.8
3,534,659	-		Psyr_2944	0.22	-2.4
3,534,843	+		Psyr_2944	0.50	-0.5
3,534,844	-		Psyr_2944	0.50	-0.8
3,534,872	-		Psyr_2944	0.54	+0.1
3,534,952	+		Psyr_2944	0.66	+0.8
3,534,952	+		Psyr_2944	0.66	-2.4
3,534,952	+		Psyr_2944	0.66	+2.1
3,534,953	-		Psyr_2944	0.67	-0.1
3,535,004	-		Psyr_2944	0.74	-1.3
3,535,004	-		Psyr_2944	0.74	+1.2
3,535,004	-		Psyr_2944	0.74	+2.1
3,535,043	+		Psyr_2944	0.80	-0.2
3,535,043	+		Psyr_2944	0.80	-1.1
3,535,044	-		Psyr_2944	0.80	-1.1
3,535,044	-		Psyr_2944	0.80	+3.7
3,535,044	-		Psyr_2944	0.80	+2.8
3,535,121	+				+0.4
3,535,235	+				+2.6
3,535,235	+				-0.6
3,535,235	+				-1.4
3,535,236	-				+1.8
3,535,236	-				-0.2
3,535,236	-				+0.8
3,535,236	-				-0.8
3,535,236	-				-2.4
3,535,236	-				+0.8
3,535,236	-				+1.3
3,535,236	-				+2.8
3,535,239	+				+2.8
3,535,332	+				-1.6
3,535,333	-				-0.6
3,535,349	+				+3.1
3,535,380	+				+2.3
3,535,380	+				+3.5
3,535,381	-				-2.2
3,535,526	+				+3.2
3,535,526	+				+3.3
3,535,526	+				-1.7
3,535,526	+				+0.1
3,535,526	+				-1.5
3,535,526	+				-0.5
3,535,526	+				-4.4
3,535,527	-				+3.8
3,535,527	-				-1.5
3,535,527	-				+0.3
3,535,573	+				+1.8
3,535,573	+				-2.3
3,535,574	-		Psyr_2945	0.10	+0.1
3,535,574	-		Psyr_2945	0.10	-1.6
3,535,574	-		Psyr_2945	0.10	+2.6
3,535,574	-		Psyr_2945	0.10	+2.3
3,535,574	-		Psyr_2945	0.10	+0.3
3,535,574	-		Psyr_2945	0.10	-0.7
3,535,574	-		Psyr_2945	0.10	+3.2
3,535,596	-		Psyr_2945	0.13	+3.7
3,535,596	-		Psyr_2945	0.13	+2.9
3,535,844	-		Psyr_2945	0.40	+2.9
3,535,862	+		Psyr_2945	0.42	-1.5
3,535,882	-		Psyr_2945	0.44	-0.9
3,535,882	-		Psyr_2945	0.44	+2.8
3,536,004	+		Psyr_2945	0.58	-2.2
3,536,024	+		Psyr_2945	0.60	-2.6
3,536,044	+		Psyr_2945	0.62	+1.8
3,536,045	-		Psyr_2945	0.62	-0.5
3,536,084	-		Psyr_2945	0.67	+3.5
3,536,085	+		Psyr_2945	0.67	-1.5
3,536,149	+		Psyr_2945	0.74	+2.8
3,536,149	+		Psyr_2945	0.74	-1.2
3,536,149	+		Psyr_2945	0.74	+0.8
3,536,149	+		Psyr_2945	0.74	+3.1
3,536,149	+		Psyr_2945	0.74	+4.1