Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2929

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,517,851	-		Psyr_2928	0.63	-0.5
3,517,912	+		Psyr_2928	0.66	-0.7
3,517,912	+		Psyr_2928	0.66	-1.0
3,517,912	+		Psyr_2928	0.66	-2.8
3,517,912	+		Psyr_2928	0.66	+0.6
3,517,912	+		Psyr_2928	0.66	+2.3
3,517,912	+		Psyr_2928	0.66	+4.6
3,517,912	+		Psyr_2928	0.66	-0.1
3,517,912	+		Psyr_2928	0.66	-1.3
3,518,050	+		Psyr_2928	0.74	-0.8
3,518,461	+				+3.1
3,518,461	+				+2.3
3,518,461	+				+0.5
3,518,461	+				-1.8
3,518,462	-				-0.6
3,518,582	+				-1.3
3,518,618	-				+2.1
3,518,830	+		Psyr_2929	0.27	-1.8
3,518,831	-		Psyr_2929	0.27	+2.9
3,518,886	+		Psyr_2929	0.33	-3.0
3,518,886	+		Psyr_2929	0.33	+1.7
3,519,091	+		Psyr_2929	0.57	+1.3
3,519,361	+		Psyr_2929	0.88	-2.3
3,519,361	+		Psyr_2929	0.88	-0.7
3,519,362	-		Psyr_2929	0.88	+2.1
3,519,362	-		Psyr_2929	0.88	-0.3
3,519,362	-		Psyr_2929	0.88	-3.1
3,519,387	+				-3.8
3,519,387	+				+1.5
3,519,388	-				+0.7
3,519,388	-				-2.6
3,519,388	-				+2.1
3,519,388	-				-0.9
3,519,519	+				-2.3
3,519,520	-				+2.7
3,519,636	+		Psyr_2930	0.27	+2.1
3,519,637	-		Psyr_2930	0.27	+0.7
3,519,882	+		Psyr_2930	0.85	+3.1
3,519,883	-		Psyr_2930	0.85	+4.9
3,520,158	+				-2.3
3,520,159	-				+2.1
3,520,159	-				+0.1
3,520,162	+				-0.8
3,520,162	+				+0.2
3,520,162	+				+0.6
3,520,162	+				-0.3
3,520,162	+				-2.4
3,520,162	+				+3.7
3,520,162	+				+2.6
3,520,162	+				+3.3
3,520,162	+				+1.3
3,520,162	+				-1.7
3,520,162	+				-0.9
3,520,162	+				-1.1
3,520,163	-				+3.4
3,520,163	-				+2.3
3,520,163	-				+2.3
3,520,163	-				-2.6
3,520,163	-				-0.6
3,520,163	-				-2.3
3,520,163	-				+1.9
3,520,163	-				+2.9
3,520,163	-				+3.1
3,520,163	-				+2.1
3,520,163	-				+3.6
3,520,163	-				+0.7
3,520,163	-				-2.7
3,520,163	-				-1.8
3,520,163	-				+2.3
3,520,163	-				-1.7
3,520,163	-				+0.7
3,520,163	-				-0.9
3,520,163	-				-1.3
3,520,163	-				-1.9
3,520,163	-				-0.9
3,520,163	-				-2.1
3,520,163	-				+3.8
3,520,163	-				-1.2
3,520,163	-				+2.3
3,520,163	-				-1.0
3,520,179	-				-1.4
3,520,198	+				-2.6
3,520,199	-				+0.7
3,520,199	-				+0.7
3,520,397	+		Psyr_2931	0.31	+2.6
3,520,397	+		Psyr_2931	0.31	+3.3
3,520,397	+		Psyr_2931	0.31	+0.0
3,520,397	+		Psyr_2931	0.31	-1.0