Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2886

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,462,008	+		Psyr_2885	0.38	+1.4
3,462,008	+		Psyr_2885	0.38	-1.7
3,462,008	+		Psyr_2885	0.38	+1.8
3,462,009	-		Psyr_2885	0.38	+2.6
3,462,009	-		Psyr_2885	0.38	+1.8
3,462,009	-		Psyr_2885	0.38	+3.8
3,462,009	-		Psyr_2885	0.38	+1.1
3,462,219	-		Psyr_2885	0.52	+0.8
3,462,741	-		Psyr_2885	0.85	+2.1
3,462,741	-		Psyr_2885	0.85	+3.5
3,462,749	+		Psyr_2885	0.86	-0.9
3,462,750	-		Psyr_2885	0.86	-0.5
3,462,750	-		Psyr_2885	0.86	-1.1
3,462,750	-		Psyr_2885	0.86	+1.8
3,462,946	+				-2.0
3,462,965	+				-0.2
3,463,232	+		Psyr_2886	0.23	+4.4
3,463,304	+		Psyr_2886	0.30	-1.8
3,463,304	+		Psyr_2886	0.30	+0.0
3,463,306	+		Psyr_2886	0.30	+2.1
3,463,306	+		Psyr_2886	0.30	-2.1
3,463,306	+		Psyr_2886	0.30	+3.4
3,463,306	+		Psyr_2886	0.30	-1.1
3,463,307	-		Psyr_2886	0.30	+2.8
3,463,430	+		Psyr_2886	0.41	+4.0
3,463,430	+		Psyr_2886	0.41	-0.7
3,463,431	-		Psyr_2886	0.41	-2.3
3,463,431	-		Psyr_2886	0.41	+2.8
3,463,431	-		Psyr_2886	0.41	-2.1
3,463,431	-		Psyr_2886	0.41	-2.0
3,463,616	+		Psyr_2886	0.57	+4.5
3,463,616	+		Psyr_2886	0.57	+3.1
3,463,616	+		Psyr_2886	0.57	-0.4
3,463,617	-		Psyr_2886	0.57	+3.0
3,463,617	-		Psyr_2886	0.57	+2.1
3,463,617	-		Psyr_2886	0.57	-2.2
3,463,631	+		Psyr_2886	0.58	-0.3
3,463,632	-		Psyr_2886	0.58	+1.2
3,463,688	+		Psyr_2886	0.63	-3.1
3,463,688	+		Psyr_2886	0.63	+4.0
3,463,689	-		Psyr_2886	0.63	-0.2
3,463,689	-		Psyr_2886	0.63	-0.8
3,463,707	+		Psyr_2886	0.65	+1.0
3,463,773	+		Psyr_2886	0.71	+2.1
3,463,773	+		Psyr_2886	0.71	+3.0
3,463,774	-		Psyr_2886	0.71	+0.8
3,463,788	+		Psyr_2886	0.72	+1.8
3,463,840	+		Psyr_2886	0.77	+3.4
3,463,981	+		Psyr_2886	0.89	+3.1
3,464,083	+				-1.7
3,464,336	+		Psyr_2887	0.46	-0.4
3,464,336	+		Psyr_2887	0.46	-0.2
3,464,489	+		Psyr_2887	0.81	+0.9
3,464,603	+				-2.4
3,464,604	-				-2.5
3,464,604	-				+0.3
3,464,611	-				-1.7
3,464,611	-				+3.6
3,464,614	+				+2.9
3,464,614	+				-1.0
3,464,781	+				-0.1
3,464,792	-				-0.2
3,464,862	+		Psyr_2888	0.14	+1.8
3,464,955	+		Psyr_2888	0.20	-1.5
3,464,955	+		Psyr_2888	0.20	+0.2
3,464,956	-		Psyr_2888	0.20	+1.8
3,465,009	+		Psyr_2888	0.23	-1.4
3,465,010	-		Psyr_2888	0.23	-3.2
3,465,010	-		Psyr_2888	0.23	+1.3
3,465,103	-		Psyr_2888	0.29	-1.9