Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2866

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,439,224	+		Psyr_2865	0.74	+1.4
3,439,492	+		Psyr_2865	0.82	+3.6
3,439,493	-		Psyr_2865	0.82	+1.2
3,439,578	+		Psyr_2865	0.85	+2.1
3,439,579	-		Psyr_2865	0.85	-3.3
3,439,636	+		Psyr_2865	0.87	-0.1
3,439,636	+		Psyr_2865	0.87	+3.8
3,439,818	+				-0.2
3,439,818	+				+4.0
3,439,818	+				+2.1
3,439,818	+				+2.9
3,439,818	+				+2.4
3,439,818	+				-2.7
3,439,818	+				-2.2
3,439,818	+				+1.8
3,439,818	+				+4.4
3,439,818	+				+3.2
3,439,818	+				-1.0
3,439,818	+				+3.1
3,439,818	+				+3.4
3,439,818	+				+0.8
3,439,819	-				+2.1
3,439,819	-				+2.6
3,439,819	-				+3.2
3,439,819	-				+2.6
3,439,819	-				-2.5
3,439,819	-				-2.1
3,439,819	-				+3.4
3,439,819	-				-0.2
3,439,902	+				+1.0
3,439,902	+				-3.0
3,439,903	-				+3.7
3,440,369	+		Psyr_2866	0.27	-0.4
3,440,369	+		Psyr_2866	0.27	+2.8
3,440,369	+		Psyr_2866	0.27	-2.6
3,440,370	-		Psyr_2866	0.27	-0.5
3,440,370	-		Psyr_2866	0.27	-1.5
3,440,370	-		Psyr_2866	0.27	-2.2
3,440,370	-		Psyr_2866	0.27	-1.9
3,440,370	-		Psyr_2866	0.27	+2.6
3,440,370	-		Psyr_2866	0.27	-3.3
3,440,370	-		Psyr_2866	0.27	+2.1
3,440,483	+		Psyr_2866	0.36	-0.4
3,440,483	+		Psyr_2866	0.36	-2.4
3,440,484	-		Psyr_2866	0.36	-1.5
3,440,609	+		Psyr_2866	0.46	-3.2
3,440,945	+		Psyr_2866	0.74	-2.3
3,440,945	+		Psyr_2866	0.74	+2.1
3,440,946	-		Psyr_2866	0.74	-0.6
3,440,967	-		Psyr_2866	0.76	-2.5
3,441,044	-		Psyr_2866	0.83	+3.6
3,441,200	+				-0.0
3,441,200	+				-0.3
3,441,200	+				-1.1
3,441,200	+				-1.1
3,441,200	+				-1.2
3,441,201	-				+2.9
3,441,201	-				+0.8
3,441,201	-				+1.0
3,441,227	+				-2.2
3,441,227	+				+2.4
3,441,228	-				-0.8
3,441,361	-				-2.3
3,441,571	+		Psyr_2867	0.12	+3.0
3,441,685	-		Psyr_2867	0.21	+2.1
3,441,877	+		Psyr_2867	0.34	-2.9