Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2862

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,431,430	+		Psyr_2860	0.30	+3.1
3,431,431	-		Psyr_2860	0.30	+3.8
3,431,591	+		Psyr_2860	0.72	-0.2
3,431,647	+		Psyr_2860	0.87	+1.8
3,431,668	+				-2.9
3,431,668	+				-0.3
3,431,668	+				+1.4
3,431,669	-				+1.8
3,431,669	-				-1.1
3,431,688	+				+1.8
3,431,689	-				-2.5
3,431,750	-				+3.5
3,431,750	-				+1.4
3,432,137	-				+1.8
3,432,147	+				+2.1
3,432,147	+				+0.8
3,432,148	-				+1.8
3,432,148	-				+1.4
3,432,148	-				-0.5
3,432,153	+				+2.8
3,432,153	+				-1.3
3,432,156	+				-1.9
3,432,236	-				+1.8
3,432,260	+				-0.2
3,432,260	+				-1.6
3,432,260	+				+1.4
3,432,261	-				-2.2
3,432,261	-				-2.3
3,432,295	-				-0.5
3,432,315	+				-1.5
3,432,316	-				+1.4
3,432,316	-				+4.2
3,432,411	+				+2.8
3,432,411	+				-0.4
3,432,411	+				+1.8
3,432,412	-				-3.0
3,432,412	-				-2.8
3,432,412	-				+3.0
3,432,412	-				-1.3
3,432,543	+		Psyr_2862	0.18	+0.1
3,432,560	-		Psyr_2862	0.20	-0.1
3,432,560	-		Psyr_2862	0.20	-0.1
3,432,560	-		Psyr_2862	0.20	+2.4
3,432,560	-		Psyr_2862	0.20	+0.6
3,432,683	+		Psyr_2862	0.35	+3.0
3,432,781	+		Psyr_2862	0.47	-0.6
3,432,782	-		Psyr_2862	0.47	+2.1
3,432,789	-		Psyr_2862	0.48	-1.5
3,432,813	+		Psyr_2862	0.51	+0.7
3,432,813	+		Psyr_2862	0.51	+4.0
3,432,813	+		Psyr_2862	0.51	+0.4
3,432,858	+		Psyr_2862	0.57	+1.8
3,432,858	+		Psyr_2862	0.57	-0.4
3,432,858	+		Psyr_2862	0.57	-2.8
3,432,858	+		Psyr_2862	0.57	+3.1
3,432,858	+		Psyr_2862	0.57	+1.8
3,432,859	-		Psyr_2862	0.57	-0.9
3,432,859	-		Psyr_2862	0.57	+2.8
3,433,024	+		Psyr_2862	0.77	+1.8
3,433,039	+		Psyr_2862	0.79	-0.8
3,433,039	+		Psyr_2862	0.79	-0.7
3,433,066	+		Psyr_2862	0.83	+3.6
3,433,179	+				+2.8
3,433,179	+				-4.3
3,433,179	+				+0.8
3,433,180	-				-1.2
3,433,180	-				+3.2
3,433,180	-				+0.6
3,433,180	-				-3.8
3,433,196	+				-1.7
3,433,623	+				-4.4
3,433,663	+				-1.7
3,433,663	+				-2.6
3,433,663	+				-0.2
3,433,664	-				+3.1
3,433,664	-				+2.1
3,433,664	-				+2.6
3,433,665	+				+2.8
3,434,022	+		Psyr_2863	0.22	+3.2
3,434,022	+		Psyr_2863	0.22	+3.2
3,434,022	+		Psyr_2863	0.22	-0.2
3,434,022	+		Psyr_2863	0.22	-0.2
3,434,022	+		Psyr_2863	0.22	-1.0
3,434,023	-		Psyr_2863	0.22	-1.4
3,434,023	-		Psyr_2863	0.22	-0.9
3,434,023	-		Psyr_2863	0.22	+3.1
3,434,190	+		Psyr_2863	0.32	-1.7