Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2823

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,396,599	+		Psyr_2821	0.89	-0.9
3,396,600	-		Psyr_2821	0.90	-0.8
3,396,600	-		Psyr_2821	0.90	+3.4
3,396,600	-		Psyr_2821	0.90	-0.4
3,396,600	-		Psyr_2821	0.90	-1.1
3,396,600	-		Psyr_2821	0.90	-2.5
3,396,868	-		Psyr_2822	0.27	+3.9
3,396,938	+		Psyr_2822	0.46	+2.6
3,396,938	+		Psyr_2822	0.46	-0.2
3,396,962	+		Psyr_2822	0.53	-1.5
3,396,962	+		Psyr_2822	0.53	+4.0
3,396,962	+		Psyr_2822	0.53	+1.1
3,396,963	-		Psyr_2822	0.53	-1.1
3,396,963	-		Psyr_2822	0.53	+3.2
3,397,094	+		Psyr_2822	0.89	-0.4
3,397,094	+		Psyr_2822	0.89	-1.3
3,397,106	+				-2.4
3,397,211	+				-2.5
3,397,558	+		Psyr_2823	0.90	-2.1
3,397,559	-				-0.2
3,397,616	+				-1.8
3,397,617	-				+2.1
3,397,617	-				+3.6
3,397,617	-				-0.5
3,397,617	-				-0.3
3,397,617	-				-2.4
3,397,621	-				+2.8
3,397,664	+				-0.2
3,397,664	+				+1.8
3,397,664	+				+0.8
3,397,664	+				-0.2
3,397,665	-				-0.5
3,397,721	+				-2.5
3,397,757	-				+3.6
3,397,821	+				-0.2
3,397,822	-				-0.4
3,397,852	+				-0.2
3,397,853	-				+3.2
3,397,975	-				-0.2
3,398,122	-				+1.8
3,398,154	+				-3.4
3,398,181	+				-0.2
3,398,244	+		Psyr_2824	0.15	-4.2
3,398,262	+		Psyr_2824	0.17	-2.0
3,398,263	-		Psyr_2824	0.18	+0.8
3,398,263	-		Psyr_2824	0.18	-2.1
3,398,263	-		Psyr_2824	0.18	+2.6
3,398,424	+		Psyr_2824	0.38	-0.2
3,398,428	-		Psyr_2824	0.39	+1.8
3,398,433	+		Psyr_2824	0.39	-0.2
3,398,451	-		Psyr_2824	0.42	-0.8
3,398,488	-		Psyr_2824	0.46	+1.8
3,398,553	+		Psyr_2824	0.55	-3.7
3,398,554	-		Psyr_2824	0.55	-2.1
3,398,558	+		Psyr_2824	0.55	-3.7