Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2738

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,323,993	+				-1.0
3,323,993	+				+2.1
3,323,994	-				+2.6
3,323,994	-				-1.9
3,324,079	+				-0.1
3,324,079	+				-0.4
3,324,079	+				-1.6
3,324,079	+				-1.8
3,324,079	+				-2.5
3,324,080	-				-1.9
3,324,080	-				+3.6
3,324,080	-				-1.0
3,324,080	-				+1.4
3,324,080	-				+3.6
3,324,080	-				+3.4
3,324,080	-				-1.3
3,324,435	+		Psyr_2737	0.49	+0.8
3,324,496	+		Psyr_2737	0.61	+1.8
3,324,496	+		Psyr_2737	0.61	+0.8
3,324,564	+		Psyr_2737	0.74	+0.8
3,324,565	-		Psyr_2737	0.75	+2.4
3,324,565	-		Psyr_2737	0.75	+2.8
3,324,568	+		Psyr_2737	0.75	-1.4
3,324,569	-		Psyr_2737	0.75	-0.4
3,324,598	+		Psyr_2737	0.81	-1.8
3,324,652	-				+0.2
3,324,835	+		Psyr_2738	0.27	-0.2
3,324,835	+		Psyr_2738	0.27	-1.3
3,324,835	+		Psyr_2738	0.27	+1.4
3,324,835	+		Psyr_2738	0.27	-2.1
3,324,835	+		Psyr_2738	0.27	+2.1
3,324,836	-		Psyr_2738	0.28	-3.6
3,324,836	-		Psyr_2738	0.28	-5.0
3,324,836	-		Psyr_2738	0.28	-3.4
3,324,945	+		Psyr_2738	0.61	+3.1
3,324,946	-		Psyr_2738	0.62	-0.4
3,324,946	-		Psyr_2738	0.62	+3.0
3,324,946	-		Psyr_2738	0.62	-0.2
3,325,110	+				+2.1
3,325,110	+				+1.8
3,325,237	+				+2.6
3,325,237	+				+2.6
3,325,237	+				-0.5
3,325,238	-				-0.9
3,325,238	-				-1.5
3,325,238	-				+3.7
3,325,238	-				-1.9
3,325,313	+				-1.2
3,325,382	+		Psyr_2739	0.18	-3.6
3,325,383	-		Psyr_2739	0.18	+1.4
3,325,806	+		Psyr_2739	0.88	-3.0
3,325,806	+		Psyr_2739	0.88	+1.8
3,325,806	+		Psyr_2739	0.88	-0.5
3,325,806	+		Psyr_2739	0.88	+3.0
3,325,806	+		Psyr_2739	0.88	-1.4
3,325,807	-		Psyr_2739	0.88	+2.4
3,325,807	-		Psyr_2739	0.88	-0.3
3,325,855	+				-0.7
3,325,855	+				+2.4
3,325,855	+				+0.8
3,325,856	-				-0.2
3,325,856	-				-0.2
3,325,856	-				-2.0
3,325,856	-				-0.2
3,325,856	-				+0.8
3,325,859	+				-1.1
3,325,918	+				-0.6
3,325,919	-				+0.5
3,325,919	-				+0.0
3,325,919	-				+4.4
3,325,960	+				+0.8
3,325,984	-				+1.4
3,326,050	+				-2.1
3,326,050	+				-0.9
3,326,050	+				+0.2
3,326,050	+				-0.8
3,326,050	+				-0.2
3,326,051	-				+2.6
3,326,051	-				+1.4
3,326,051	-				+2.8