Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2707

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,287,081	+				+1.8
3,287,081	+				-1.9
3,287,081	+				-2.1
3,287,082	-				+2.6
3,287,082	-				-1.6
3,287,082	-				-3.1
3,287,161	+				-3.1
3,287,161	+				-1.8
3,287,162	-				+2.1
3,287,219	+				+4.2
3,287,219	+				+1.8
3,287,219	+				+3.8
3,287,220	-				-1.0
3,287,501	+		Psyr_2706	0.40	+2.4
3,287,502	-		Psyr_2706	0.40	+2.1
3,287,502	-		Psyr_2706	0.40	+1.8
3,287,689	+		Psyr_2706	0.65	+0.8
3,287,689	+		Psyr_2706	0.65	-0.2
3,287,689	+		Psyr_2706	0.65	+3.6
3,287,689	+		Psyr_2706	0.65	+2.1
3,287,689	+		Psyr_2706	0.65	+2.6
3,287,690	-		Psyr_2706	0.65	-1.3
3,287,690	-		Psyr_2706	0.65	+0.5
3,287,690	-		Psyr_2706	0.65	-3.2
3,287,729	+		Psyr_2706	0.71	-0.2
3,287,729	+		Psyr_2706	0.71	-4.2
3,287,729	+		Psyr_2706	0.71	+1.8
3,287,730	-		Psyr_2706	0.71	+3.6
3,287,730	-		Psyr_2706	0.71	+2.4
3,287,730	-		Psyr_2706	0.71	+1.4
3,287,867	+		Psyr_2706	0.89	+1.8
3,287,867	+		Psyr_2706	0.89	+3.0
3,287,867	+		Psyr_2706	0.89	+0.7
3,287,867	+		Psyr_2706	0.89	+1.4
3,287,867	+		Psyr_2706	0.89	-0.8
3,287,868	-		Psyr_2706	0.89	+2.6
3,287,868	-		Psyr_2706	0.89	+0.4
3,287,868	-		Psyr_2706	0.89	+2.1
3,287,868	-		Psyr_2706	0.89	+3.6
3,287,894	+				-2.0
3,287,894	+				+0.8
3,287,894	+				-3.7
3,287,895	-				+0.3
3,287,895	-				-0.9
3,287,895	-				+0.1
3,287,895	-				-2.6
3,287,949	+				+3.1
3,287,949	+				+1.4
3,287,949	+				-1.6
3,287,950	-				+0.8
3,287,950	-				+0.1
3,287,950	-				+0.5
3,287,950	-				-3.2
3,288,174	+		Psyr_2707	0.11	+2.8
3,288,175	-		Psyr_2707	0.11	+2.6
3,288,175	-				+2.8
3,288,175	-		Psyr_2707	0.11	-1.3
3,288,255	+		Psyr_2707	0.20	+0.5
3,288,398	-		Psyr_2707	0.36	+0.7
3,288,398	-		Psyr_2707	0.36	-3.6
3,288,405	+		Psyr_2707	0.37	+0.8
3,288,405	+		Psyr_2707	0.37	-0.1
3,288,405	+		Psyr_2707	0.37	-1.4
3,288,405	+		Psyr_2707	0.37	-0.7
3,288,406	-		Psyr_2707	0.37	+3.1
3,288,408	+		Psyr_2707	0.37	+2.1
3,288,409	-		Psyr_2707	0.37	-1.0
3,288,437	+		Psyr_2707	0.41	+4.1
3,288,448	+		Psyr_2707	0.42	+2.6
3,288,449	-		Psyr_2707	0.42	-1.1
3,288,449	-		Psyr_2707	0.42	+3.9
3,288,526	+		Psyr_2707	0.51	+3.0
3,288,572	+		Psyr_2707	0.56	+1.4
3,288,572	+		Psyr_2707	0.56	-1.2
3,288,572	+		Psyr_2707	0.56	+0.8
3,288,706	-		Psyr_2707	0.71	-2.3
3,288,706	-		Psyr_2707	0.71	+2.6
3,288,706	-		Psyr_2707	0.71	+3.3
3,288,948	+				+2.8
3,289,016	+				-1.6
3,289,016	+				-0.6
3,289,017	-				+2.1
3,289,036	+				+1.4
3,289,132	-				+0.8
3,289,207	-				+2.6
3,289,281	+		Psyr_2708	0.16	+1.4
3,289,281	+		Psyr_2708	0.16	+0.6
3,289,281	+		Psyr_2708	0.16	+0.2
3,289,584	+		Psyr_2708	0.45	-1.2
3,289,584	+		Psyr_2708	0.45	-1.9
3,289,584	+		Psyr_2708	0.45	-1.0
3,289,584	+		Psyr_2708	0.45	+1.2
3,289,584	+		Psyr_2708	0.45	+1.4
3,289,585	-		Psyr_2708	0.45	+3.0
3,289,912	-		Psyr_2708	0.75	+3.3
3,289,912	-		Psyr_2708	0.75	-0.6