Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2672

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
3,242,373	-				+3.4
3,242,375	+				+1.4
3,242,376	-				-4.4
3,242,465	+		Psyr_2671	0.19	+0.2
3,242,509	+		Psyr_2671	0.23	+1.4
3,242,509	+		Psyr_2671	0.23	-0.3
3,242,509	+		Psyr_2671	0.23	+2.1
3,242,509	+		Psyr_2671	0.23	-1.0
3,242,509	+		Psyr_2671	0.23	+3.0
3,242,509	+		Psyr_2671	0.23	+3.6
3,242,509	+		Psyr_2671	0.23	-4.4
3,242,510	-		Psyr_2671	0.23	+2.1
3,242,510	-		Psyr_2671	0.23	+1.8
3,242,510	-		Psyr_2671	0.23	+3.4
3,242,510	-		Psyr_2671	0.23	+1.8
3,242,510	-		Psyr_2671	0.23	-1.3
3,242,510	-		Psyr_2671	0.23	-1.1
3,242,510	-		Psyr_2671	0.23	+3.7
3,242,510	-		Psyr_2671	0.23	-0.8
3,242,510	-		Psyr_2671	0.23	+0.2
3,242,532	+		Psyr_2671	0.26	-0.5
3,242,533	-		Psyr_2671	0.26	+1.7
3,242,597	+		Psyr_2671	0.33	+1.0
3,242,619	+		Psyr_2671	0.35	-1.2
3,242,620	-		Psyr_2671	0.35	+2.6
3,242,620	-		Psyr_2671	0.35	+2.1
3,242,620	-		Psyr_2671	0.35	-0.8
3,242,620	-		Psyr_2671	0.35	-0.2
3,242,620	-		Psyr_2671	0.35	+1.4
3,242,620	-		Psyr_2671	0.35	-1.5
3,242,737	-		Psyr_2671	0.48	-1.1
3,242,737	-		Psyr_2671	0.48	+2.4
3,242,855	+		Psyr_2671	0.60	-0.8
3,242,855	+		Psyr_2671	0.60	+1.8
3,242,862	+		Psyr_2671	0.61	-0.2
3,243,102	+		Psyr_2671	0.86	-2.4
3,243,102	+		Psyr_2671	0.86	-1.4
3,243,102	+		Psyr_2671	0.86	-1.0
3,243,103	-		Psyr_2671	0.86	+2.1
3,243,211	+				+1.8
3,243,212	-				+3.7
3,243,243	-				-3.0
3,243,243	-				-1.6
3,243,243	-				-0.7
3,243,245	+				+1.4
3,243,245	+				+0.1
3,243,245	+				-0.3
3,243,246	-				+1.4
3,243,246	-				-1.5
3,243,264	+				+3.4
3,243,265	-				-0.2
3,243,504	+		Psyr_2672	0.15	+1.4
3,243,698	+		Psyr_2672	0.30	-1.7
3,243,699	-		Psyr_2672	0.30	-0.3
3,243,699	-		Psyr_2672	0.30	-0.2
3,243,945	+		Psyr_2672	0.49	+3.1
3,243,945	+		Psyr_2672	0.49	-1.9
3,243,945	+		Psyr_2672	0.49	-0.2
3,243,946	-		Psyr_2672	0.49	-1.7
3,243,946	-		Psyr_2672	0.49	+4.6
3,244,062	+		Psyr_2672	0.58	+3.8
3,244,063	-		Psyr_2672	0.58	-2.6
3,244,063	-		Psyr_2672	0.58	+1.4
3,244,116	-		Psyr_2672	0.62	+1.8
3,244,208	-		Psyr_2672	0.69	+0.8
3,244,305	+		Psyr_2672	0.77	-0.3
3,244,312	+		Psyr_2672	0.77	+1.4
3,244,312	+		Psyr_2672	0.77	+2.4
3,244,312	+		Psyr_2672	0.77	-1.9
3,244,312	+		Psyr_2672	0.77	-1.4
3,244,312	+		Psyr_2672	0.77	+1.8
3,244,313	-		Psyr_2672	0.77	+3.0
3,244,313	-		Psyr_2672	0.77	+0.2
3,244,313	-		Psyr_2672	0.77	+2.6
3,244,313	-		Psyr_2672	0.77	-1.2
3,244,313	-		Psyr_2672	0.77	+2.1
3,244,313	-		Psyr_2672	0.77	+2.4
3,244,314	+		Psyr_2672	0.77	-0.8
3,244,314	+		Psyr_2672	0.77	+3.0
3,244,315	-		Psyr_2672	0.77	+3.1
3,244,315	-		Psyr_2672	0.77	+1.8
3,244,315	-		Psyr_2672	0.77	+2.1
3,244,315	-		Psyr_2672	0.77	+1.8
3,244,315	-		Psyr_2672	0.77	-2.6
3,244,355	+		Psyr_2672	0.81	+2.6
3,244,355	+		Psyr_2672	0.81	+3.1
3,244,356	-		Psyr_2672	0.81	-1.1
3,244,447	+		Psyr_2672	0.88	+0.5
3,244,447	+		Psyr_2672	0.88	+2.4
3,244,448	-		Psyr_2672	0.88	+2.6
3,244,448	-		Psyr_2672	0.88	+1.3
3,244,594	-				-0.5
3,244,705	-				+2.1
3,244,726	+				-1.1
3,244,726	+				+3.0
3,244,726	+				-0.2
3,244,726	+				+2.8
3,244,726	+				+2.8
3,244,727	-				-2.7
3,244,727	-				+3.0
3,244,775	+		Psyr_2673	0.12	+1.4
3,244,831	+		Psyr_2673	0.16	+0.5
3,244,832	-		Psyr_2673	0.16	+0.8
3,244,832	-		Psyr_2673	0.16	-0.3
3,244,908	+		Psyr_2673	0.22	-1.4
3,245,067	-		Psyr_2673	0.34	+1.8
3,245,331	+		Psyr_2673	0.53	+1.8
3,245,331	+		Psyr_2673	0.53	+3.9
3,245,331	+		Psyr_2673	0.53	-1.1
3,245,332	-		Psyr_2673	0.53	-2.1
3,245,332	-		Psyr_2673	0.53	-1.9
3,245,417	+		Psyr_2673	0.59	+1.8