Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2535

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,948,943	+		Psyr_2534	0.76	+2.1
2,948,943	+		Psyr_2534	0.76	-0.4
2,948,954	-		Psyr_2534	0.77	+3.1
2,948,995	-		Psyr_2534	0.82	-1.8
2,948,995	-		Psyr_2534	0.82	-2.1
2,949,099	+				-3.0
2,949,102	+				-1.8
2,949,103	-				+2.6
2,949,103	-				-2.6
2,949,108	+				+1.4
2,949,108	+				+1.8
2,949,109	-				+2.8
2,949,109	-				+3.7
2,949,217	+				-0.3
2,949,217	+				-1.6
2,949,217	+				+3.3
2,949,217	+				-2.9
2,949,218	-				-2.0
2,949,218	-				+2.4
2,949,218	-				+1.4
2,949,218	-				+2.4
2,949,246	+				-1.4
2,949,249	+				-1.9
2,949,250	-				-1.1
2,949,277	+				+1.4
2,949,278	-				-3.2
2,949,458	+				+1.8
2,949,458	+				-4.1
2,949,458	+				+0.8
2,949,458	+				-2.2
2,949,458	+				-4.3
2,949,458	+				+2.3
2,949,458	+				+0.8
2,949,458	+				+1.8
2,949,458	+				+1.4
2,949,458	+				+0.8
2,949,459	-				-1.1
2,949,459	-				+2.8
2,949,459	-				-0.7
2,949,459	-				+3.1
2,949,459	-				-1.9
2,949,459	-				+3.0
2,949,475	-				+2.6
2,949,477	-				+1.8
2,949,503	+				+3.5
2,949,503	+				-1.6
2,949,504	-				+0.3
2,949,504	-				+3.5
2,949,504	-				+3.0
2,949,537	-				+3.1
2,949,537	-				-0.9
2,949,745	-		Psyr_2535	0.17	+1.8
2,949,759	+		Psyr_2535	0.18	-0.2
2,949,760	-		Psyr_2535	0.18	-1.1
2,949,760	-		Psyr_2535	0.18	+1.4
2,949,873	+		Psyr_2535	0.29	-0.2
2,949,874	-		Psyr_2535	0.29	-0.2
2,949,878	-		Psyr_2535	0.30	+0.1
2,949,878	-		Psyr_2535	0.30	-0.6
2,950,051	+		Psyr_2535	0.46	-1.1
2,950,052	-		Psyr_2535	0.46	-1.7
2,950,052	-		Psyr_2535	0.46	+2.4
2,950,097	-				+1.8
2,950,437	-		Psyr_2535	0.83	+1.8
2,950,437	-		Psyr_2535	0.83	-1.7
2,950,572	+				+3.5
2,950,572	+				-0.7
2,950,572	+				-1.6
2,950,572	+				+2.6
2,950,572	+				+3.0
2,950,572	+				-3.2
2,950,572	+				+0.5
2,950,572	+				+0.8
2,950,572	+				+3.3
2,950,573	-				+0.3
2,950,573	-				-1.6
2,950,573	-				+1.4
2,950,573	-				+3.0
2,950,573	-				-1.7
2,950,573	-				-1.4
2,950,575	-				-2.1
2,950,652	+				+1.8
2,950,726	+				+2.1
2,950,919	+		Psyr_2536	0.23	-0.3
2,950,919	+		Psyr_2536	0.23	-2.0
2,950,920	-		Psyr_2536	0.23	-2.4
2,950,920	-		Psyr_2536	0.23	-1.9
2,950,920	-		Psyr_2536	0.23	-0.9
2,950,920	-		Psyr_2536	0.23	-2.0
2,951,392	+		Psyr_2536	0.71	+3.0
2,951,392	+		Psyr_2536	0.71	+3.0
2,951,392	+		Psyr_2536	0.71	+3.3
2,951,392	+		Psyr_2536	0.71	-1.3
2,951,392	+		Psyr_2536	0.71	+3.7
2,951,393	-		Psyr_2536	0.71	+2.8