Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2520

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,928,170	+		Psyr_2519	0.39	+1.0
2,928,325	+		Psyr_2519	0.54	-0.7
2,928,325	+		Psyr_2519	0.54	+1.8
2,928,325	+		Psyr_2519	0.54	+2.4
2,928,325	+		Psyr_2519	0.54	+1.4
2,928,325	+		Psyr_2519	0.54	+4.3
2,928,326	-		Psyr_2519	0.54	-0.2
2,928,326	-		Psyr_2519	0.54	+3.0
2,928,326	-		Psyr_2519	0.54	+3.7
2,928,416	+		Psyr_2519	0.63	+3.9
2,928,416	+		Psyr_2519	0.63	+4.2
2,928,417	-		Psyr_2519	0.63	+0.8
2,928,417	-		Psyr_2519	0.63	-1.3
2,928,417	-		Psyr_2519	0.63	+2.1
2,928,548	+		Psyr_2519	0.77	-2.0
2,928,549	-		Psyr_2519	0.77	-1.5
2,928,549	-		Psyr_2519	0.77	+1.8
2,928,553	-		Psyr_2519	0.77	+4.0
2,928,553	-		Psyr_2519	0.77	+1.4
2,928,611	+		Psyr_2519	0.83	+1.8
2,928,611	+		Psyr_2519	0.83	-1.1
2,928,612	-		Psyr_2519	0.83	-0.1
2,928,612	-		Psyr_2519	0.83	+3.9
2,928,612	-		Psyr_2519	0.83	-2.1
2,928,701	+				-1.1
2,928,701	+				-4.4
2,928,702	-				-1.3
2,928,702	-				-1.9
2,928,702	-				+2.1
2,928,702	-				-1.1
2,928,892	+				-1.6
2,928,969	-				+1.4
2,929,004	+				-3.7
2,929,005	-				+3.9
2,929,029	+				+0.8
2,929,030	-				-1.1
2,929,336	+		Psyr_2520	0.57	+4.4
2,929,410	+		Psyr_2520	0.69	-2.1
2,929,863	+		Psyr_2521	0.42	-2.9
2,929,863	+		Psyr_2521	0.42	-0.3
2,929,863	+		Psyr_2521	0.42	-0.8
2,929,863	+		Psyr_2521	0.42	-1.2
2,929,864	-		Psyr_2521	0.42	+2.9
2,929,864	-		Psyr_2521	0.42	+0.0
2,929,864	-		Psyr_2521	0.42	-1.9
2,929,864	-		Psyr_2521	0.42	-0.9
2,930,229	+				+2.8
2,930,229	+				+0.8
2,930,229	+				+2.8
2,930,230	-				+0.8
2,930,494	+		Psyr_2522	0.18	+0.2