Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2518

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,926,103	+		Psyr_2516	0.65	+0.8
2,926,103	+		Psyr_2516	0.65	+0.8
2,926,109	+		Psyr_2516	0.65	-2.0
2,926,109	+		Psyr_2516	0.65	-0.7
2,926,109	+		Psyr_2516	0.65	+3.4
2,926,109	+		Psyr_2516	0.65	+3.3
2,926,109	+		Psyr_2516	0.65	-2.3
2,926,109	+		Psyr_2516	0.65	+1.8
2,926,109	+		Psyr_2516	0.65	+0.8
2,926,109	+		Psyr_2516	0.65	-4.7
2,926,110	-		Psyr_2516	0.65	+1.8
2,926,110	-		Psyr_2516	0.65	-2.4
2,926,110	-		Psyr_2516	0.65	+2.0
2,926,110	-		Psyr_2516	0.65	-0.3
2,926,110	-		Psyr_2516	0.65	+3.7
2,926,110	-		Psyr_2516	0.65	-0.8
2,926,110	-		Psyr_2516	0.65	-0.7
2,926,199	+		Psyr_2516	0.74	-0.2
2,926,200	-		Psyr_2516	0.74	+3.3
2,926,307	+		Psyr_2516	0.85	-0.6
2,926,308	-		Psyr_2516	0.85	-1.0
2,926,310	+		Psyr_2516	0.85	-2.5
2,926,310	+		Psyr_2516	0.85	-1.9
2,926,311	-		Psyr_2516	0.85	+1.8
2,926,339	+		Psyr_2516	0.88	-3.0
2,926,340	-		Psyr_2516	0.88	-2.3
2,926,789	+				+0.4
2,926,812	-				-3.0
2,926,954	+				-0.2
2,927,022	+				-1.7
2,927,084	+				-5.6
2,927,084	+				+2.1
2,927,231	-		Psyr_2518	0.22	+2.4
2,927,231	-		Psyr_2518	0.22	-1.6
2,927,403	+		Psyr_2518	0.47	-2.5
2,927,403	+		Psyr_2518	0.47	-0.6
2,927,403	+		Psyr_2518	0.47	-0.2
2,927,409	+		Psyr_2518	0.48	-2.5
2,927,409	+		Psyr_2518	0.48	+1.8
2,927,409	+		Psyr_2518	0.48	+2.6
2,927,409	+		Psyr_2518	0.48	-2.3
2,927,410	-		Psyr_2518	0.48	+3.5
2,927,410	-		Psyr_2518	0.48	-0.5
2,927,410	-		Psyr_2518	0.48	-2.0
2,927,410	-		Psyr_2518	0.48	-2.4
2,927,526	+		Psyr_2518	0.65	-0.2
2,927,526	+		Psyr_2518	0.65	-1.9
2,927,527	-		Psyr_2518	0.65	-1.4
2,927,527	-		Psyr_2518	0.65	+4.7
2,927,544	+		Psyr_2518	0.68	-1.2
2,927,544	+		Psyr_2518	0.68	-2.8
2,927,544	+		Psyr_2518	0.68	-1.1
2,927,544	+		Psyr_2518	0.68	-3.7
2,927,544	+		Psyr_2518	0.68	+3.1
2,927,544	+		Psyr_2518	0.68	+3.3
2,927,544	+		Psyr_2518	0.68	+3.0
2,927,544	+		Psyr_2518	0.68	-2.1
2,927,544	+		Psyr_2518	0.68	+2.4
2,927,707	-				+2.6
2,927,819	+				+3.0
2,927,820	-				-2.8
2,927,925	-		Psyr_2519	0.14	-0.2
2,928,170	+		Psyr_2519	0.39	+1.0
2,928,325	+		Psyr_2519	0.54	-0.7
2,928,325	+		Psyr_2519	0.54	+1.8
2,928,325	+		Psyr_2519	0.54	+2.4
2,928,325	+		Psyr_2519	0.54	+1.4
2,928,325	+		Psyr_2519	0.54	+4.3
2,928,326	-		Psyr_2519	0.54	-0.2
2,928,326	-		Psyr_2519	0.54	+3.0
2,928,326	-		Psyr_2519	0.54	+3.7
2,928,416	+		Psyr_2519	0.63	+3.9
2,928,416	+		Psyr_2519	0.63	+4.2
2,928,417	-		Psyr_2519	0.63	+0.8
2,928,417	-		Psyr_2519	0.63	-1.3
2,928,417	-		Psyr_2519	0.63	+2.1
2,928,548	+		Psyr_2519	0.77	-2.0
2,928,549	-		Psyr_2519	0.77	-1.5
2,928,549	-		Psyr_2519	0.77	+1.8
2,928,553	-		Psyr_2519	0.77	+4.0
2,928,553	-		Psyr_2519	0.77	+1.4
2,928,611	+		Psyr_2519	0.83	+1.8
2,928,611	+		Psyr_2519	0.83	-1.1
2,928,612	-		Psyr_2519	0.83	-0.1
2,928,612	-		Psyr_2519	0.83	+3.9
2,928,612	-		Psyr_2519	0.83	-2.1
2,928,701	+				-1.1
2,928,701	+				-4.4
2,928,702	-				-1.3
2,928,702	-				-1.9
2,928,702	-				+2.1
2,928,702	-				-1.1