Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2401

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,782,112	+				-1.8
2,782,112	+				+2.7
2,782,223	+				-0.5
2,782,223	+				+3.3
2,782,223	+				-2.4
2,782,223	+				+1.9
2,782,224	-				+2.7
2,782,224	-				-1.6
2,782,364	+		Psyr_2400	0.20	-1.1
2,782,364	+		Psyr_2400	0.20	-2.6
2,782,364	+		Psyr_2400	0.20	-2.1
2,782,364	+		Psyr_2400	0.20	+2.2
2,782,364	+		Psyr_2400	0.20	-0.2
2,782,364	+		Psyr_2400	0.20	+3.0
2,782,364	+		Psyr_2400	0.20	+0.9
2,782,364	+		Psyr_2400	0.20	-0.1
2,782,365	-		Psyr_2400	0.21	+1.9
2,782,365	-		Psyr_2400	0.21	+0.3
2,782,365	-		Psyr_2400	0.21	+2.7
2,782,365	-		Psyr_2400	0.21	-0.1
2,782,553	+		Psyr_2400	0.40	+0.3
2,782,553	+		Psyr_2400	0.40	+3.3
2,782,553	+		Psyr_2400	0.40	+0.9
2,782,553	+		Psyr_2400	0.40	-0.9
2,782,553	+		Psyr_2400	0.40	+3.0
2,782,553	+		Psyr_2400	0.40	-1.7
2,782,553	+		Psyr_2400	0.40	+1.9
2,782,553	+		Psyr_2400	0.40	+1.5
2,782,553	+		Psyr_2400	0.40	-2.1
2,782,554	-		Psyr_2400	0.40	-3.5
2,782,554	-		Psyr_2400	0.40	+0.3
2,782,554	-		Psyr_2400	0.40	-0.7
2,782,554	-		Psyr_2400	0.40	-2.9
2,782,554	-		Psyr_2400	0.40	+2.7
2,782,676	+		Psyr_2400	0.53	+2.9
2,782,827	+		Psyr_2400	0.69	+2.7
2,782,827	+		Psyr_2400	0.69	+0.9
2,782,828	-		Psyr_2400	0.69	+3.0
2,782,874	+		Psyr_2400	0.74	+1.5
2,782,874	+		Psyr_2400	0.74	+3.0
2,782,874	+		Psyr_2400	0.74	+1.5
2,782,875	-		Psyr_2400	0.74	-0.8
2,782,875	-		Psyr_2400	0.74	-1.1
2,782,875	-		Psyr_2400	0.74	+2.9
2,782,918	+		Psyr_2400	0.78	-0.7
2,783,110	+				+2.9
2,783,110	+				+3.8
2,783,110	+				+3.0
2,783,110	+				+3.2
2,783,111	-				+3.7
2,783,168	-				+2.5
2,783,217	-		Psyr_2401	0.11	+4.2
2,783,269	+		Psyr_2401	0.16	+2.2
2,783,269	+		Psyr_2401	0.16	+1.1
2,783,441	-		Psyr_2401	0.32	+1.5
2,783,650	+		Psyr_2401	0.53	+3.0
2,783,651	-		Psyr_2401	0.53	+3.2
2,783,726	+		Psyr_2401	0.60	+2.5
2,783,727	-		Psyr_2401	0.60	+2.2
2,783,737	+		Psyr_2401	0.61	+2.5
2,783,737	+		Psyr_2401	0.61	+2.2
2,784,196	+				-1.5
2,784,197	-				-3.2
2,784,197	-				+1.9
2,784,222	+				+2.2
2,784,222	+				-2.2
2,784,223	-				+3.3
2,784,239	+				+3.6
2,784,239	+				-2.4
2,784,240	-				-1.5
2,784,240	-				+1.9
2,784,240	-				-1.9
2,784,442	+				-0.6
2,784,484	-				+1.5
2,784,484	-				-0.1
2,784,484	-				-0.1
2,784,564	+		Psyr_2402	0.13	+2.9
2,784,564	+		Psyr_2402	0.13	+3.3
2,784,565	-		Psyr_2402	0.13	+2.2
2,784,589	-		Psyr_2402	0.15	-0.5
2,784,589	-		Psyr_2402	0.15	+0.1
2,784,665	+		Psyr_2402	0.22	-1.9
2,784,736	-		Psyr_2402	0.28	-0.2
2,784,858	+		Psyr_2402	0.39	+0.9
2,784,858	+		Psyr_2402	0.39	+3.3