Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2393

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,773,919	+		Psyr_2391	0.79	-2.6
2,773,919	+		Psyr_2391	0.79	-2.2
2,773,919	+		Psyr_2391	0.79	-0.1
2,773,919	+		Psyr_2391	0.79	+2.9
2,773,919	+		Psyr_2391	0.79	+1.9
2,773,919	+		Psyr_2391	0.79	+2.2
2,773,920	-		Psyr_2391	0.79	-0.3
2,773,920	-		Psyr_2391	0.79	+0.6
2,773,920	-		Psyr_2391	0.79	-1.3
2,773,920	-		Psyr_2391	0.79	+1.5
2,773,920	-		Psyr_2391	0.79	+1.5
2,773,920	-		Psyr_2391	0.79	-2.1
2,773,923	+		Psyr_2391	0.79	+1.5
2,773,923	+		Psyr_2391	0.79	+3.6
2,773,923	+		Psyr_2391	0.79	-1.3
2,773,923	+		Psyr_2391	0.79	-1.2
2,773,924	-		Psyr_2391	0.79	-0.1
2,773,924	-		Psyr_2391	0.79	-0.1
2,773,924	-		Psyr_2391	0.79	+0.9
2,773,924	-		Psyr_2391	0.79	-5.2
2,773,924	-		Psyr_2391	0.79	-0.1
2,773,924	-		Psyr_2391	0.79	+1.5
2,773,924	-		Psyr_2391	0.79	+1.5
2,773,924	-		Psyr_2391	0.79	-2.3
2,774,123	+				-2.0
2,774,123	+				+2.5
2,774,123	+				+1.5
2,774,123	+				+3.7
2,774,124	-				+3.0
2,774,197	+		Psyr_2392	0.15	-0.1
2,774,197	+		Psyr_2392	0.15	+2.7
2,774,197	+		Psyr_2392	0.15	-4.0
2,774,198	-		Psyr_2392	0.15	+2.2
2,774,198	-		Psyr_2392	0.15	-2.6
2,774,198	-		Psyr_2392	0.15	-0.8
2,774,198	-		Psyr_2392	0.15	+0.9
2,774,198	-		Psyr_2392	0.15	-0.9
2,774,202	+		Psyr_2392	0.15	+4.0
2,774,202	+		Psyr_2392	0.15	+2.5
2,774,203	-		Psyr_2392	0.16	-2.1
2,774,203	-		Psyr_2392	0.16	+2.7
2,774,203	-		Psyr_2392	0.16	+1.5
2,774,203	-		Psyr_2392	0.16	-1.0
2,774,388	+		Psyr_2392	0.45	+2.9
2,774,559	+		Psyr_2392	0.73	+1.9
2,774,560	-		Psyr_2392	0.73	+3.8
2,774,560	-		Psyr_2392	0.73	+3.0
2,774,718	+				+2.2
2,774,718	+				+1.9
2,774,718	+				-2.0
2,774,719	-				+4.1
2,774,719	-				+2.9
2,774,719	-				-0.7
2,774,719	-				-0.7
2,774,740	+				+1.1
2,774,883	-				-0.4
2,774,883	-				+2.5
2,775,022	+		Psyr_2393	0.26	-2.0
2,775,023	-		Psyr_2393	0.26	-2.8
2,775,282	+		Psyr_2393	0.70	-1.1
2,775,283	-		Psyr_2393	0.70	+3.6
2,775,283	-		Psyr_2393	0.70	-1.7
2,775,390	+		Psyr_2393	0.89	-1.1
2,775,391	-		Psyr_2393	0.89	-3.4
2,775,411	+				-3.1
2,775,411	+				-1.3
2,775,412	-				-1.5
2,775,412	-				-1.3
2,775,412	-				-1.2
2,775,413	+				-1.1
2,775,413	+				-1.8
2,775,414	-				-0.3
2,775,603	+				-0.5
2,775,604	-				+4.1
2,775,675	+				-4.7
2,775,675	+				-2.5
2,775,675	+				-4.2
2,775,676	-				+1.5
2,775,676	-				-0.0
2,775,886	-		Psyr_2394	0.14	+4.3
2,776,041	+		Psyr_2394	0.25	+0.3
2,776,041	+		Psyr_2394	0.25	-2.2
2,776,042	-		Psyr_2394	0.25	-1.7
2,776,042	-		Psyr_2394	0.25	-0.3
2,776,110	-		Psyr_2394	0.30	+2.7
2,776,162	-		Psyr_2394	0.34	-0.5
2,776,162	-		Psyr_2394	0.34	+1.9