Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2347

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,722,854	+		Psyr_2346	0.19	-2.7
2,722,854	+		Psyr_2346	0.19	+2.7
2,722,923	-		Psyr_2346	0.27	-3.9
2,722,923	-		Psyr_2346	0.27	-5.0
2,722,990	-		Psyr_2346	0.34	-3.8
2,723,070	+		Psyr_2346	0.43	-0.1
2,723,070	+		Psyr_2346	0.43	-0.1
2,723,075	-		Psyr_2346	0.44	-1.8
2,723,121	+		Psyr_2346	0.49	+0.6
2,723,121	+		Psyr_2346	0.49	+2.2
2,723,221	+		Psyr_2346	0.61	-0.1
2,723,222	-		Psyr_2346	0.61	-1.0
2,723,389	+		Psyr_2346	0.80	+0.9
2,723,389	+		Psyr_2346	0.80	-2.7
2,723,390	-		Psyr_2346	0.80	+1.9
2,723,396	+		Psyr_2346	0.81	+2.2
2,723,401	-		Psyr_2346	0.81	-0.1
2,723,401	-		Psyr_2346	0.81	-5.2
2,723,401	-		Psyr_2346	0.81	-0.1
2,723,442	-		Psyr_2346	0.86	-0.4
2,723,445	+		Psyr_2346	0.86	+0.9
2,723,446	-		Psyr_2346	0.86	-0.1
2,723,601	+				-0.1
2,723,602	-				-0.4
2,723,715	+				-0.1
2,723,761	+				-3.9
2,723,961	-		Psyr_2347	0.19	-3.1
2,723,970	-		Psyr_2347	0.21	+0.1
2,724,061	-		Psyr_2347	0.35	-2.4
2,724,128	-		Psyr_2347	0.45	-2.4
2,724,258	-		Psyr_2347	0.65	-3.8
2,724,258	-		Psyr_2347	0.65	-2.9
2,724,311	+				-0.1
2,724,471	+				+1.1
2,724,509	-				+0.9
2,724,627	-				+2.7
2,724,649	+				+3.3
2,724,677	+				+0.9
2,724,692	+				-2.9
2,724,849	-		Psyr_2348	0.30	-3.1
2,724,878	-		Psyr_2348	0.34	+1.1
2,725,195	-		Psyr_2348	0.76	-0.1
2,725,206	+		Psyr_2348	0.77	-3.1
2,725,207	-		Psyr_2348	0.78	-0.1
2,725,207	-		Psyr_2348	0.78	-0.1
2,725,220	+		Psyr_2348	0.79	-2.8
2,725,287	+		Psyr_2348	0.88	-0.1
2,725,288	-		Psyr_2348	0.88	+0.2
2,725,335	+				-0.3
2,725,339	-				+0.1
2,725,340	+				-1.5
2,725,340	+				-0.1
2,725,340	+				+3.7
2,725,341	-				-2.6
2,725,341	-				+4.0
2,725,345	+				-1.2
2,725,381	-				+0.9
2,725,387	-				+4.6
2,725,432	+				+3.3
2,725,467	-				-2.0