Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2324

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,701,603	+				-1.5
2,701,604	-				-0.2
2,701,604	-				-3.0
2,701,669	+				+3.1
2,701,669	+				-1.8
2,701,737	+				-0.5
2,701,741	-				-4.2
2,701,741	-				-3.1
2,701,820	+				+0.8
2,701,821	-				-3.4
2,701,821	-				+1.4
2,701,827	+				-1.6
2,701,828	-				+1.8
2,701,828	-				-0.2
2,701,828	-				-2.4
2,701,946	+				-2.3
2,701,947	-				-1.6
2,701,947	-				+1.4
2,701,961	+				+1.4
2,701,961	+				+3.6
2,701,961	+				+1.8
2,702,009	+				+0.3
2,702,032	+				-2.0
2,702,037	-				-0.5
2,702,092	+				+2.8
2,702,092	+				+1.4
2,702,093	-				+4.3
2,702,093	-				-0.4
2,702,093	-				-1.0
2,702,093	-				+1.4
2,702,264	-				+2.6
2,702,264	-				+3.5
2,702,320	+				+4.0
2,702,358	+				-3.5
2,702,445	+		Psyr_2324	0.11	+1.8
2,702,445	+		Psyr_2324	0.11	+1.4
2,702,445	+		Psyr_2324	0.11	+4.1
2,702,446	-		Psyr_2324	0.12	+3.3
2,702,453	-		Psyr_2324	0.13	+3.8
2,702,490	+		Psyr_2324	0.23	-1.5
2,702,491	-		Psyr_2324	0.23	-0.2
2,702,692	+		Psyr_2324	0.75	-0.7
2,702,725	+		Psyr_2324	0.84	-1.1
2,702,725	+		Psyr_2324	0.84	+2.4
2,702,725	+		Psyr_2324	0.84	+3.3
2,702,726	-		Psyr_2324	0.84	+0.8
2,702,726	-		Psyr_2324	0.84	-0.3
2,702,726	-		Psyr_2324	0.84	-0.2
2,702,726	-		Psyr_2324	0.84	+1.8
2,702,726	-		Psyr_2324	0.84	+1.2
2,702,736	+		Psyr_2324	0.87	+2.4
2,702,737	-		Psyr_2324	0.87	+2.6
2,702,898	+				+2.1
2,702,898	+				-2.4
2,702,898	+				-1.0
2,702,899	-				-0.3
2,702,919	+				-1.7
2,702,919	+				+1.8
2,702,919	+				-1.1
2,702,920	-				-2.4
2,702,920	-				+1.8
2,702,920	-				-1.4
2,702,920	-				+1.8
2,702,920	-				+2.4
2,702,920	-				-1.0
2,702,992	-				+1.8
2,702,993	+				+1.8
2,703,026	+				-0.3
2,703,114	+		Psyr_2325	0.21	-0.0
2,703,114	+		Psyr_2325	0.21	+2.4
2,703,115	-		Psyr_2325	0.21	-1.8
2,703,136	+		Psyr_2325	0.25	+3.7
2,703,138	+		Psyr_2325	0.25	-0.6
2,703,205	+		Psyr_2325	0.38	+2.8
2,703,205	+		Psyr_2325	0.38	-0.6
2,703,206	-		Psyr_2325	0.38	+0.8
2,703,206	-		Psyr_2325	0.38	-0.0
2,703,206	-		Psyr_2325	0.38	+2.6
2,703,206	-		Psyr_2325	0.38	-1.3
2,703,206	-		Psyr_2325	0.38	-0.5
2,703,264	+		Psyr_2325	0.50	-1.3
2,703,265	-		Psyr_2325	0.50	+3.3
2,703,265	-		Psyr_2325	0.50	-2.0
2,703,367	+		Psyr_2325	0.69	-1.5
2,703,368	-		Psyr_2325	0.70	+2.4
2,703,368	-		Psyr_2325	0.70	+0.4
2,703,394	+		Psyr_2325	0.75	-0.0
2,703,394	+		Psyr_2325	0.75	-2.5
2,703,394	+		Psyr_2325	0.75	+3.5
2,703,395	-		Psyr_2325	0.75	-2.1
2,703,395	-		Psyr_2325	0.75	-1.5
2,703,395	-		Psyr_2325	0.75	-1.9
2,703,395	-		Psyr_2325	0.75	-1.5
2,703,395	-		Psyr_2325	0.75	-1.0
2,703,395	-		Psyr_2325	0.75	-0.3
2,703,395	-		Psyr_2325	0.75	+3.5
2,703,395	-		Psyr_2325	0.75	-0.2
2,703,395	-		Psyr_2325	0.75	+1.8
2,703,583	+				-0.2
2,703,583	+				-1.0
2,703,584	-				+1.8
2,703,584	-				+1.4
2,703,584	-				+1.8
2,703,654	+		Psyr_2326	0.21	+3.3
2,703,654	+		Psyr_2326	0.21	-0.2
2,703,655	-		Psyr_2326	0.21	-3.5
2,703,655	-		Psyr_2326	0.21	-3.9
2,703,722	+		Psyr_2326	0.34	+0.3
2,703,722	+		Psyr_2326	0.34	+3.7
2,703,723	-		Psyr_2326	0.34	+1.8