Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2320

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,694,446	+				+0.1
2,694,446	+				-0.3
2,694,446	+				-0.1
2,694,447	-				-2.1
2,694,467	+				-1.1
2,694,467	+				-0.6
2,694,468	-				+1.4
2,694,468	-				+1.0
2,694,468	-				-4.0
2,694,468	-				-0.7
2,694,468	-				-2.2
2,694,567	-				+3.9
2,694,570	-				+0.8
2,694,570	-				+3.4
2,694,570	-				+4.0
2,694,597	+				+3.7
2,694,608	+				-1.5
2,694,622	-				+3.1
2,694,624	+				-2.3
2,694,624	+				-1.1
2,694,624	+				+0.1
2,694,625	-				-2.3
2,694,713	-				+2.1
2,694,740	+				+1.4
2,694,741	-				+4.3
2,694,744	+				-3.4
2,694,959	+				+3.3
2,694,959	+				-2.4
2,694,959	+				+1.8
2,694,959	+				+1.8
2,694,960	-				-0.4
2,694,960	-				+1.4
2,694,960	-				-1.9
2,694,960	-				-4.7
2,694,960	-				+2.1
2,694,960	-				+0.8
2,694,963	+				+2.1
2,694,964	-				+1.8
2,695,031	-				+3.1
2,695,031	-				-3.0
2,695,144	-				+3.3
2,695,144	-				+2.4
2,695,144	-				-2.2
2,695,144	-				-0.2
2,695,163	+				-1.4
2,695,164	-				-0.2
2,695,164	-				-2.4
2,695,165	+				-0.4
2,695,313	+				-3.4
2,695,314	-				-4.1
2,695,392	+				-3.5
2,695,392	+				-0.9
2,695,392	+				+2.1
2,695,392	+				-2.5
2,695,393	-				-2.2
2,695,393	-				-0.2
2,695,393	-				-0.2
2,695,393	-				-0.2
2,695,395	-				-0.2
2,695,398	+				-0.2
2,695,399	-				-3.5
2,695,470	+		Psyr_2320	0.12	-3.4
2,695,534	-		Psyr_2320	0.17	-0.2
2,695,597	+		Psyr_2320	0.21	-3.4
2,695,613	+		Psyr_2320	0.22	-0.2
2,695,614	-		Psyr_2320	0.22	-4.4
2,695,614	-		Psyr_2320	0.22	-5.0
2,695,614	-		Psyr_2320	0.22	-4.1
2,695,712	+		Psyr_2320	0.28	-0.2
2,695,743	+				+0.8
2,695,823	-		Psyr_2320	0.35	+1.8
2,695,928	+		Psyr_2320	0.42	+3.0
2,695,934	+		Psyr_2320	0.43	-3.0
2,695,935	-		Psyr_2320	0.43	+0.8
2,695,951	+		Psyr_2320	0.44	+1.8
2,695,983	-		Psyr_2320	0.46	-0.2
2,696,196	+		Psyr_2320	0.60	-1.7
2,696,196	+		Psyr_2320	0.60	+2.1
2,696,266	-		Psyr_2320	0.65	-4.7
2,696,336	+		Psyr_2320	0.69	+0.4
2,696,347	-		Psyr_2320	0.70	+2.4
2,696,433	-		Psyr_2320	0.75	+1.4
2,696,466	+		Psyr_2320	0.78	-2.5
2,696,467	-		Psyr_2320	0.78	-2.2
2,696,554	-		Psyr_2320	0.83	-0.2
2,696,554	-		Psyr_2320	0.83	+1.4
2,696,555	+		Psyr_2320	0.83	+2.4
2,696,555	+		Psyr_2320	0.83	+0.8
2,696,555	+		Psyr_2320	0.83	+3.4
2,696,555	+		Psyr_2320	0.83	-1.5
2,696,555	+		Psyr_2320	0.83	+1.8
2,696,556	-		Psyr_2320	0.83	-2.8
2,696,556	-		Psyr_2320	0.83	+0.8
2,696,556	-		Psyr_2320	0.83	-0.2
2,696,559	+		Psyr_2320	0.84	-2.1
2,696,560	-		Psyr_2320	0.84	-2.4
2,696,561	+		Psyr_2320	0.84	+3.4
2,696,598	-		Psyr_2320	0.86	-1.5
2,696,617	-		Psyr_2320	0.87	+0.8
2,696,617	-		Psyr_2320	0.87	-0.2
2,696,617	-		Psyr_2320	0.87	+3.1
2,696,622	+		Psyr_2320	0.88	-0.2
2,696,623	-		Psyr_2320	0.88	+2.6
2,696,623	-		Psyr_2320	0.88	+0.8
2,696,666	+				-0.2
2,696,669	+				+0.8
2,696,670	-				-0.8
2,696,670	-				-1.6
2,696,754	+				-1.5
2,696,754	+				-0.4
2,696,755	-				+3.3
2,696,755	-				+2.1
2,696,755	-				-0.7
2,696,756	+				+0.8
2,696,756	+				+3.6
2,696,756	+				+1.8
2,696,756	+				+0.8
2,696,757	-				+1.8
2,696,757	-				+0.8
2,696,757	-				+2.1
2,696,760	+				+1.4
2,696,760	+				-1.4
2,696,809	+				+3.4
2,696,841	+				-2.1
2,696,872	+				+2.6
2,696,873	-				+0.8
2,696,873	-				+2.1
2,696,999	+		Psyr_2321	0.12	-0.8
2,696,999	+		Psyr_2321	0.12	-0.2
2,697,000	-		Psyr_2321	0.12	-0.2
2,697,000	-		Psyr_2321	0.12	-2.5
2,697,073	+		Psyr_2321	0.17	-1.8
2,697,105	+		Psyr_2321	0.19	-3.9
2,697,157	+		Psyr_2321	0.23	+3.4
2,697,311	+		Psyr_2321	0.33	+2.4
2,697,311	+		Psyr_2321	0.33	-2.1
2,697,311	+		Psyr_2321	0.33	+0.3
2,697,312	-		Psyr_2321	0.33	-0.2
2,697,550	+		Psyr_2321	0.49	-1.8
2,697,551	-		Psyr_2321	0.49	-2.8
2,697,682	-		Psyr_2321	0.58	+1.8
2,697,685	+		Psyr_2321	0.58	+2.4
2,697,685	+		Psyr_2321	0.58	-0.2
2,697,685	+		Psyr_2321	0.58	-1.1
2,697,686	-		Psyr_2321	0.58	-0.2
2,697,686	-		Psyr_2321	0.58	-0.2
2,697,691	+		Psyr_2321	0.58	+2.4
2,697,804	+		Psyr_2321	0.66	-0.2