Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2303

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,675,580	-		Psyr_2302	0.33	-0.6
2,675,765	+		Psyr_2302	0.47	+1.8
2,675,765	+		Psyr_2302	0.47	-2.1
2,675,822	+		Psyr_2302	0.51	+2.4
2,675,822	+		Psyr_2302	0.51	+4.0
2,675,822	+		Psyr_2302	0.51	-2.1
2,675,856	+		Psyr_2302	0.54	+0.6
2,675,892	+		Psyr_2302	0.57	-2.3
2,675,892	+		Psyr_2302	0.57	-2.6
2,675,892	+		Psyr_2302	0.57	-1.7
2,676,100	+		Psyr_2302	0.72	-1.8
2,676,100	+		Psyr_2302	0.72	-0.6
2,676,100	+		Psyr_2302	0.72	+2.8
2,676,100	+		Psyr_2302	0.72	+3.0
2,676,100	+		Psyr_2302	0.72	+0.0
2,676,100	+		Psyr_2302	0.72	-2.2
2,676,100	+		Psyr_2302	0.72	+3.0
2,676,100	+		Psyr_2302	0.72	-0.5
2,676,100	+		Psyr_2302	0.72	-0.2
2,676,101	-		Psyr_2302	0.73	-1.0
2,676,135	-		Psyr_2302	0.75	-2.3
2,676,135	-		Psyr_2302	0.75	+2.1
2,676,135	-		Psyr_2302	0.75	+2.6
2,676,135	-		Psyr_2302	0.75	-1.0
2,676,280	+		Psyr_2302	0.86	+2.6
2,676,281	-		Psyr_2302	0.86	-1.7
2,676,375	-				+3.6
2,676,447	-				+0.8
2,676,447	-				+3.0
2,676,447	-				-0.1
2,676,637	+		Psyr_2303	0.12	+3.3
2,676,638	-		Psyr_2303	0.12	-2.2
2,676,667	+		Psyr_2303	0.14	-2.4
2,676,668	-		Psyr_2303	0.14	-2.8
2,676,668	-		Psyr_2303	0.14	-1.3
2,676,668	-		Psyr_2303	0.14	+2.4
2,676,668	-		Psyr_2303	0.14	+3.5
2,676,745	+		Psyr_2303	0.20	+3.3
2,676,911	+		Psyr_2303	0.31	-1.6
2,676,911	+		Psyr_2303	0.31	-1.7
2,676,913	+		Psyr_2303	0.31	-2.3
2,676,913	+		Psyr_2303	0.31	-2.1
2,676,914	-		Psyr_2303	0.31	+1.4
2,676,914	-		Psyr_2303	0.31	-3.2
2,676,914	-		Psyr_2303	0.31	-3.1
2,676,914	-		Psyr_2303	0.31	+1.4
2,676,914	-		Psyr_2303	0.31	-2.2
2,676,988	+		Psyr_2303	0.36	+2.4
2,676,991	+		Psyr_2303	0.37	+3.0
2,676,992	-		Psyr_2303	0.37	+3.1
2,677,068	+		Psyr_2303	0.42	-1.3
2,677,069	-		Psyr_2303	0.42	+3.1
2,677,177	+		Psyr_2303	0.49	-1.5
2,677,177	+		Psyr_2303	0.49	-0.2
2,677,177	+		Psyr_2303	0.49	+3.0
2,677,178	-		Psyr_2303	0.50	+3.6
2,677,178	-		Psyr_2303	0.50	+3.4
2,677,178	-		Psyr_2303	0.50	-1.5
2,677,178	-		Psyr_2303	0.50	+2.6
2,677,179	+		Psyr_2303	0.50	-0.9
2,677,179	+		Psyr_2303	0.50	-1.2
2,677,179	+		Psyr_2303	0.50	-0.8
2,677,179	+		Psyr_2303	0.50	+1.8
2,677,179	+		Psyr_2303	0.50	+0.1
2,677,179	+		Psyr_2303	0.50	-0.2
2,677,179	+		Psyr_2303	0.50	-1.0
2,677,179	+		Psyr_2303	0.50	-0.0
2,677,179	+		Psyr_2303	0.50	+0.0
2,677,179	+		Psyr_2303	0.50	-1.5
2,677,179	+		Psyr_2303	0.50	+1.8
2,677,180	-		Psyr_2303	0.50	-1.1
2,677,180	-		Psyr_2303	0.50	-2.4
2,677,180	-		Psyr_2303	0.50	-1.3
2,677,180	-		Psyr_2303	0.50	+1.8
2,677,180	-		Psyr_2303	0.50	-1.8
2,677,180	-		Psyr_2303	0.50	-0.0
2,677,475	-		Psyr_2303	0.70	-3.5
2,677,475	-		Psyr_2303	0.70	-1.3
2,677,496	-		Psyr_2303	0.71	+2.8
2,677,520	+		Psyr_2303	0.73	+3.8
2,677,520	+		Psyr_2303	0.73	+3.1
2,677,545	-		Psyr_2303	0.75	-1.3
2,677,640	+		Psyr_2303	0.81	+3.9
2,677,641	-		Psyr_2303	0.81	+3.1
2,677,666	+		Psyr_2303	0.83	-4.1
2,677,666	+		Psyr_2303	0.83	+2.1
2,677,666	+		Psyr_2303	0.83	-1.6
2,677,667	-		Psyr_2303	0.83	+1.4
2,677,667	-		Psyr_2303	0.83	+1.8
2,677,803	-				-0.9
2,677,874	+				+2.1
2,677,875	-				-0.2
2,677,875	-				-2.2
2,677,875	-				-1.5
2,677,875	-				-0.7
2,677,875	-				+0.1
2,677,875	-				-1.2
2,677,914	+				+1.4
2,677,914	+				+3.1
2,677,914	+				-3.3
2,677,914	+				+3.0
2,677,914	+				-1.2
2,678,056	+				+2.1
2,678,057	-				-1.0
2,678,299	+				+3.3
2,678,299	+				+1.6
2,678,299	+				-0.2
2,678,299	+				+3.4
2,678,299	+				-2.2
2,678,299	+				+2.4
2,678,299	+				+0.8
2,678,299	+				+0.7
2,678,301	+				+3.4
2,678,301	+				+3.4
2,678,301	+				+3.0
2,678,301	+				+3.5
2,678,302	-				-2.7
2,678,302	-				+0.8
2,678,302	-				-4.8
2,678,398	+				-1.2
2,678,399	-				+2.6
2,678,399	-				-2.2
2,678,400	+				+3.3