Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2281

Experiment: KB with Acridine orange 62.5 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acridine orange 62.5 ug/ml
2,647,794	+		Psyr_2280	0.32	-0.8
2,647,795	-		Psyr_2280	0.32	+0.6
2,647,795	-		Psyr_2280	0.32	-2.6
2,648,088	+		Psyr_2280	0.58	+2.4
2,648,301	+		Psyr_2280	0.78	+3.4
2,648,338	+		Psyr_2280	0.81	+0.2
2,648,359	-		Psyr_2280	0.83	+1.8
2,648,483	+				+0.8
2,648,483	+				-1.6
2,648,483	+				+2.4
2,648,484	-				+0.8
2,648,484	-				+3.3
2,648,652	+				+1.8
2,648,652	+				+2.1
2,648,652	+				-1.2
2,648,652	+				-2.1
2,648,652	+				-2.5
2,648,653	-				+0.5
2,648,653	-				+4.3
2,648,675	+				+3.1
2,648,675	+				-0.2
2,648,676	-				+3.6
2,648,685	+				+0.8
2,648,686	-				+2.8
2,648,686	-				-0.2
2,648,695	+				+3.0
2,648,696	-				+1.8
2,648,743	+				+3.3
2,649,021	+		Psyr_2281	0.14	+2.4
2,649,177	+		Psyr_2281	0.23	+2.1
2,649,177	+		Psyr_2281	0.23	+0.2
2,649,288	+		Psyr_2281	0.30	-0.3
2,649,335	-		Psyr_2281	0.32	+2.8
2,649,335	-		Psyr_2281	0.32	+3.5
2,649,356	+		Psyr_2281	0.34	+2.1
2,649,424	-		Psyr_2281	0.38	+2.6
2,649,424	-		Psyr_2281	0.38	-0.2
2,649,424	-		Psyr_2281	0.38	+3.4
2,649,432	-		Psyr_2281	0.38	+2.1
2,649,433	+		Psyr_2281	0.38	-4.6
2,649,433	+		Psyr_2281	0.38	+0.8
2,649,433	+		Psyr_2281	0.38	+0.8
2,649,433	+		Psyr_2281	0.38	-0.2
2,649,433	+		Psyr_2281	0.38	+1.4
2,649,434	-		Psyr_2281	0.38	-1.3
2,649,434	-		Psyr_2281	0.38	+3.5
2,649,434	-		Psyr_2281	0.38	+0.9
2,649,434	-		Psyr_2281	0.38	-4.1
2,649,434	-		Psyr_2281	0.38	-1.2
2,649,434	-		Psyr_2281	0.38	+2.4
2,649,434	-		Psyr_2281	0.38	+3.4
2,649,434	-		Psyr_2281	0.38	-3.2
2,649,794	-		Psyr_2281	0.60	-1.9
2,650,001	+		Psyr_2281	0.72	+2.1
2,650,321	-				+2.1
2,650,321	-				+1.4
2,650,321	-				+4.1
2,650,379	+				-3.4
2,650,379	+				-0.2
2,650,380	-				+2.4
2,650,380	-				+3.4
2,650,380	-				-1.3
2,650,861	+		Psyr_2282	0.12	+0.8
2,650,862	-		Psyr_2282	0.12	-3.3
2,650,963	+				-4.1
2,650,963	+		Psyr_2282	0.15	-2.5
2,650,963	+		Psyr_2282	0.15	-0.2
2,650,963	+		Psyr_2282	0.15	-0.3
2,650,963	+		Psyr_2282	0.15	-3.7
2,651,047	+		Psyr_2282	0.18	-1.4
2,651,047	+		Psyr_2282	0.18	-2.7
2,651,048	-		Psyr_2282	0.18	+1.1
2,651,048	-		Psyr_2282	0.18	-2.4
2,651,129	+		Psyr_2282	0.21	+1.4
2,651,269	+		Psyr_2282	0.25	-2.3
2,651,270	-		Psyr_2282	0.25	-1.7